RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ATP2B3Q16720 1220 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 PABPC1LQ4VXU2 614 aaKnown RBP5.39□□□□□ -1.55
NIPBL-207ENST00000513819 CCDC93Q567U6 631 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 DACT2Q5SW24 774 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 XRRA1Q6P2D8 792 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 SEM1Q6ZVN7 128 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 FRMD5Q7Z6J6 570 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 TAX1BP1Q86VP1 789 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 LRRC56Q8IYG6 542 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-207ENST00000513819 ZNF512Q96ME7 567 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-207ENST00000513819 P2RX7Q99572 595 aaKnown RBP5.39□□□□□ -1.55
NIPBL-207ENST00000513819 ARPC5LQ9BPX5 153 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 PLA2G12BQ9BX93 195 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 MEGF9Q9H1U4 602 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 SEC61A2Q9H9S3 476 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 KIAA1586Q9HCI6 787 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-207ENST00000513819 CPNE7Q9UBL6 633 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 SNX13Q9Y5W8 968 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 DUSP10Q9Y6W6 482 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 PNPLA7Q6ZV29 1317 aa5.39□□□□□ -1.55
NIPBL-207ENST00000513819 PLEKHD1A6NEE1 506 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 MYO1FO00160 1098 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 TBX3O15119 743 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 MATN4O95460 622 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 SNRPA1P09661 255 aaKnown RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 MTHFD1P11586 935 aaKnown RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 BRAFP15056 766 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 ZEB1P37275 1124 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 TM4SF4P48230 202 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 EPHB4P54760 987 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 SUMO3P55854 103 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 CLRN1P58418 232 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 FMO1Q01740 532 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 DUSP8Q13202 625 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 MORC3Q14149 939 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 FKBP15Q5T1M5 1219 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 C1QL4Q86Z23 238 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 SP8Q8IXZ3 490 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 FAM186BQ8IYM0 893 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 IL17RDQ8NFM7 739 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 FEZF2Q8TBJ5 459 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 PHKBQ93100 1093 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 PGBD4Q96DM1 585 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 CCDC138Q96M89 665 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 TOX2Q96NM4 488 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 OR14A2Q96R54 314 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 NDC1Q9BTX1 674 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 LSM14BQ9BX40 385 aaKnown RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 PACSIN1Q9BY11 444 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 ZNF287Q9HBT7 754 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 NLRC4Q9NPP4 1024 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 FBXO34Q9NWN3 711 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 PIH1D1Q9NWS0 290 aaKnown RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 SIDT1Q9NXL6 827 aaKnown RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 OGDHLQ9ULD0 1010 aa5.38□□□□□ -1.55
NIPBL-207ENST00000513819 ARID1BQ8NFD5 2236 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-207ENST00000513819 LOC102724159A0A0B4J2E5 919 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 PRSS29PA6NIE9 313 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 TBKBP1A7MCY6 615 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 B5MCH6 92 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 PJA2O43164 708 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 LAMTOR5O43504 91 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 GNAI3P08754 354 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 ZKSCAN1P17029 563 aaPredicted RBP5.37□□□□□ -1.55
NIPBL-207ENST00000513819 CNR2P34972 360 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 KCNJ5P48544 419 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 GNAI1P63096 354 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 NOMO3P69849 1222 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 GRM7Q14831 915 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 PWP2Q15269 919 aaKnown RBP5.37□□□□□ -1.55
NIPBL-207ENST00000513819 VPS72Q15906 364 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 CNGA2Q16280 664 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 CSRP2Q16527 193 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 BMT2Q1RMZ1 405 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 GORABQ5T7V8 394 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 TOGARAM2Q6ZUX3 1019 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 SESTD1Q86VW0 696 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 CERS3Q8IU89 383 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 PCSK9Q8NBP7 692 aaKnown RBP5.37□□□□□ -1.55
NIPBL-207ENST00000513819 RNF169Q8NCN4 708 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 VPS37AQ8NEZ2 397 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 BORCS6Q96GS4 357 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 RIPOR3Q96MK2 946 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 BTBD1Q9H0C5 482 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 NELFAQ9H3P2 528 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 MYH16Q9H6N6 1097 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 GNL3LQ9NVN8 582 aaKnown RBP5.37□□□□□ -1.55
NIPBL-207ENST00000513819 STK32BQ9NY57 414 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 SLC45A2Q9UMX9 530 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 DMTF1Q9Y222 760 aa5.37□□□□□ -1.55
NIPBL-207ENST00000513819 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.37□□□□□ -1.55
NIPBL-207ENST00000513819 RASA4BC9J798 803 aa5.36□□□□□ -1.55
NIPBL-207ENST00000513819 RASA4O43374 803 aa5.36□□□□□ -1.55
NIPBL-207ENST00000513819 SLC43A1O75387 559 aa5.36□□□□□ -1.55
NIPBL-207ENST00000513819 BMP7P18075 431 aa5.36□□□□□ -1.55
NIPBL-207ENST00000513819 CASP5P51878 434 aa5.36□□□□□ -1.55
NIPBL-207ENST00000513819 PSMC1P62191 440 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms