RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 HEATR3Q7Z4Q2 680 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 CRYGNQ8WXF5 182 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 E2F7Q96AV8 911 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 CHFRQ96EP1 664 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 CAMK1GQ96NX5 476 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 MAP3K14Q99558 947 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 DSCC1Q9BVC3 393 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 NXF3Q9H4D5 531 aaKnown RBP10.66□□□□□ -0.7
PTPN20-228ENST00000513266 FSCN3Q9NQT6 498 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 DISC1Q9NRI5 854 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 TMEM74BQ9NUR3 256 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 SEPT9Q9UHD8 586 aaPredicted RBP10.66□□□□□ -0.7
PTPN20-228ENST00000513266 TCEAL9Q9UHQ7 104 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 GIT1Q9Y2X7 761 aa10.66□□□□□ -0.7
PTPN20-228ENST00000513266 CASTOR2A6NHX0 329 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 WDR64B1ANS9 1081 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 MAFO75444 373 aaPredicted RBP10.65□□□□□ -0.7
PTPN20-228ENST00000513266 FGFR3P22607 806 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 AKAP5P24588 427 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 IGFBP6P24592 240 aaPredicted RBP10.65□□□□□ -0.7
PTPN20-228ENST00000513266 ITPKBP27987 946 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 EPHA5P54756 1037 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 CFHR1Q03591 330 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 TUSC3Q13454 348 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 TRIP6Q15654 476 aaKnown RBP10.65□□□□□ -0.7
PTPN20-228ENST00000513266 CYP4A22Q5TCH4 519 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.65□□□□□ -0.7
PTPN20-228ENST00000513266 SRGAP1Q7Z6B7 1085 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 ZNF654Q8IZM8 581 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 HDDC3Q8N4P3 179 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 DAGLBQ8NCG7 672 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
PTPN20-228ENST00000513266 LZTS2Q9BRK4 669 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 RIC8AQ9NPQ8 531 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 COL4A3BPQ9Y5P4 624 aa10.65□□□□□ -0.7
PTPN20-228ENST00000513266 ERICH2A1L162 156 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 PRRG1O14668 218 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 TSPAN1O60635 241 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 ABLIM3O94929 683 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 SEC24AO95486 1093 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 EGFP01133 1207 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 MYL4P12829 197 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 SDSP20132 328 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 DGKEP52429 567 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 PDE1AP54750 535 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 ROR1Q01973 937 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
PTPN20-228ENST00000513266 HNRNPDQ14103 355 aaKnown RBP10.64□□□□□ -0.71
PTPN20-228ENST00000513266 ARHGAP29Q52LW3 1261 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 SYT13Q7L8C5 426 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 SLCO6A1Q86UG4 719 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 C11orf74Q86VG3 221 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 OR2I1PQ8NGU4 316 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 ZNF461Q8TAF7 563 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 SHKBP1Q8TBC3 707 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 CPB2Q96IY4 423 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 SLITRK6Q9H5Y7 841 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 CEP72Q9P209 647 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 INSL5Q9Y5Q6 135 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 BACE2Q9Y5Z0 518 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 DOPEY1Q5JWR5 2465 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 ZMYM2Q9UBW7 1377 aa10.64□□□□□ -0.71
PTPN20-228ENST00000513266 CAPN9O14815 690 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 DDAH1O94760 285 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 CYP3A4P08684 503 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 SRGAP2CP0DJJ0 459 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 ANTXR2P58335 489 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 GRSF1Q12849 480 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 DMC1Q14565 340 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 ITPRIPL2Q3MIP1 535 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 USP39Q53GS9 565 aaKnown RBP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 WWC2Q6AWC2 1192 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 NOTUMQ6P988 496 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 CWC27Q6UX04 472 aaKnown RBP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 MARCH9Q86YJ5 346 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 SYT12Q8IV01 421 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 ARID3BQ8IVW6 561 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 TCEAL8Q8IYN2 117 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 TMEFF1Q8IYR6 380 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 GTPBP2Q9BX10 602 aaKnown RBP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 TPSD1Q9BZJ3 242 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 CSRNP2Q9H175 543 aa10.63□□□□□ -0.71
PTPN20-228ENST00000513266 FBRSL1Q9HCM7 1045 aaKnown RBP10.63□□□□□ -0.71
PTPN20-228ENST00000513266 ATXN2Q99700 1313 aaKnown RBP10.62□□□□□ -0.71
PTPN20-228ENST00000513266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-228ENST00000513266 TRABD2BA6NFA1 517 aa10.62□□□□□ -0.71
PTPN20-228ENST00000513266 TRDMT1O14717 391 aaKnown RBP10.62□□□□□ -0.71
PTPN20-228ENST00000513266 SH3BP5O60239 455 aa10.62□□□□□ -0.71
PTPN20-228ENST00000513266 OPHN1O60890 802 aa10.62□□□□□ -0.71
PTPN20-228ENST00000513266 NTRK1P04629 796 aa10.62□□□□□ -0.71
PTPN20-228ENST00000513266 ATF2P15336 505 aa10.62□□□□□ -0.71
PTPN20-228ENST00000513266 TKTP29401 623 aaKnown RBP10.62□□□□□ -0.71
PTPN20-228ENST00000513266 ELF1P32519 619 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms