RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 PSMD6Q15008 389 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 MEA1Q16626 185 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 FAM187BQ17R55 369 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 CBWD6Q4V339 395 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 CBWD3Q5JTY5 395 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 CBWD5Q5RIA9 395 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 E4F1Q66K89 784 aaPredicted RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 TAF2Q6P1X5 1199 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 TSHZ1Q6ZSZ6 1077 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 TOGARAM2Q6ZUX3 1019 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 CATSPER4Q7RTX7 472 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 TMEM139Q8IV31 216 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 TRPV1Q8NER1 839 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 PARD3BQ8TEW8 1205 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 ZBTB10Q96DT7 871 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 NT5C1BQ96P26 610 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 CGRRF1Q99675 332 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
HTT-209ENST00000512068 TSGA10Q9BZW7 698 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 UPF3AQ9H1J1 476 aaKnown RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 GANQ9H2C0 597 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 FZD8Q9H461 694 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 NHEJ1Q9H9Q4 299 aaPredicted RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 RPF1Q9H9Y2 349 aaKnown RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 KCND1Q9NSA2 647 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 C1orf112Q9NSG2 853 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 APEX2Q9UBZ4 518 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 PLAGL2Q9UPG8 496 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 TNFSF13BQ9Y275 285 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 PCDHB11Q9Y5F2 797 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 FHOD1Q9Y613 1164 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 EPN1Q9Y6I3 576 aaPredicted RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 TRIP12Q14669 1992 aaPredicted RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 CNTNAP2Q9UHC6 1331 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 SSU72P8A0A1W2PR75 194 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 HAS3O00219 553 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 EPHB6O15197 1021 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 KIF5CO60282 957 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 ZC3H11AO75152 810 aaKnown RBP eCLIP8.72□□□□□ -1.01
HTT-209ENST00000512068 CABYRO75952 493 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 IL18RAPO95256 599 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 NDUFA10O95299 355 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 TMEM191BP0C7N4 346 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 MCF2P10911 925 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 HNRNPH3P31942 346 aaKnown RBP8.72□□□□□ -1.01
HTT-209ENST00000512068 MFAP3P55082 362 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 DLG4P78352 724 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 PPP3CAQ08209 521 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 NNTQ13423 1086 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 TRPC3Q13507 836 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 NCOA4Q13772 614 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 ENOX2Q16206 610 aaKnown RBP8.72□□□□□ -1.01
HTT-209ENST00000512068 KIZQ2M2Z5 673 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 DCAF4L1Q3SXM0 396 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 RAD9BQ6WBX8 426 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 THNSL1Q8IYQ7 743 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 KIAA0319LQ8IZA0 1049 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 NME8Q8N427 588 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 LINC01465Q8N7H1 131 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 KAT2BQ92831 832 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 ANKRD36BP1Q96IX9 119 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 ZBTB45Q96K62 511 aaPredicted RBP8.72□□□□□ -1.01
HTT-209ENST00000512068 DESI2Q9BSY9 194 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 STK33Q9BYT3 514 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 TRIM6Q9C030 488 aaPredicted RBP8.72□□□□□ -1.01
HTT-209ENST00000512068 TMEM117Q9H0C3 514 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 HDAC6Q9UBN7 1215 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 DDX20Q9UHI6 824 aaKnown RBP8.72□□□□□ -1.01
HTT-209ENST00000512068 DNAJC12Q9UKB3 198 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 THSD7BQ9C0I4 1608 aa8.72□□□□□ -1.01
HTT-209ENST00000512068 MBLAC1A4D2B0 266 aaPredicted RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 EIF3CLB5ME19 914 aaKnown RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 KRT86O43790 486 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 NOL4O94818 638 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 IGHA2P01877 340 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 CLTAP09496 248 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 ANXA13P27216 316 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 CCND3P30281 292 aaPredicted RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 AXLP30530 894 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 SOX5P35711 763 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 EIF4A3P38919 411 aaKnown RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 USP8P40818 1118 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 KIF11P52732 1056 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 TMEM62Q0P6H9 643 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 USP4Q13107 963 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 MTF1Q14872 753 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 DRAP1Q14919 205 aaPredicted RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 ARHGAP44Q17R89 818 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 EML3Q32P44 896 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 EPC2Q52LR7 807 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 MARCH8Q5T0T0 291 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 PPP1R26Q5T8A7 1209 aaPredicted RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 IQCEQ6IPM2 695 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms