RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 MYH3P11055 1940 aa4.32□□□□□ -1.72
UBE2D3-226ENST00000508635 MROH5Q6ZUA9 1318 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 ZNF646O15015 1829 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 PSME4Q14997 1843 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 SPEF2Q9C093 1822 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 H0Y858 1186 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 WNT10BO00744 389 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 PLIN1O60240 522 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 NOBOXO60393 691 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 FKBP9O95302 570 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 STAT3P40763 770 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 ADCYAP1R1P41586 468 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 GYG1P46976 350 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 ID4P47928 161 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 RARSP54136 660 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 FKBP1AP62942 108 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 FKBP1BP68106 108 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 CD83Q01151 205 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 NOGQ13253 232 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 UBE4AQ14139 1066 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 ESRP1Q6NXG1 681 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 FKBP9P1Q75LS8 142 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 GPR155Q7Z3F1 870 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 ZNF804AQ7Z570 1209 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 RTN4RL1Q86UN2 441 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 TDRD7Q8NHU6 1098 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 CHAC2Q8WUX2 184 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 USP7Q93009 1102 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 LCORQ96JN0 433 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 FAM84BQ96KN1 310 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 YTHDC1Q96MU7 727 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 ADAM7Q9H2U9 754 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 MS4A5Q9H3V2 200 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 BICC1Q9H694 974 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 CAAP1Q9H8G2 361 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 CNNM1Q9NRU3 951 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 SMC4Q9NTJ3 1288 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 MAGEL2Q9UJ55 1249 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 CDC42EP3Q9UKI2 254 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 HDAC9Q9UKV0 1011 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 NOB1Q9ULX3 412 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 SCAF8Q9UPN6 1271 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 SPO11Q9Y5K1 396 aa4.31□□□□□ -1.72
UBE2D3-226ENST00000508635 TRPM7Q96QT4 1865 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 FAM205AQ6ZU69 1335 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 UBA6A0AVT1 1052 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 LCHNA4D1U4 455 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 MROH6A6NGR9 719 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 TGM5O43548 720 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 CA12O43570 354 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 KLHL18O94889 574 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 APOL3O95236 402 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 PDE8BO95263 885 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 CYP17A1P05093 508 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 HIBADHP31937 336 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 SOX5P35711 763 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 RFX5P48382 616 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 FNTBP49356 437 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 RGS3P49796 1198 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 SLC6A3Q01959 620 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 DLGAP5Q15398 846 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 LRRC24Q50LG9 513 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 FAM26FQ5R3K3 315 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 PRAMEF9Q5VWM5 478 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 MOB2Q70IA6 237 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 OTOP2Q7RTS6 562 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 FERMT3Q86UX7 667 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 PASD1Q8IV76 773 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 EFHBQ8N7U6 833 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 VGLL2Q8N8G2 317 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 KLHDC4Q8TBB5 520 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 C16orf92Q96LL3 132 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 TUBGCP5Q96RT8 1024 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 BTBD2Q9BX70 525 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 API5Q9BZZ5 524 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 XYLT2Q9H1B5 865 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 OR10A5Q9H207 317 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 MYRFQ9Y2G1 1151 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 PCDHAC2Q9Y5I4 1007 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 A0A1B0GUL6 1792 aa4.3□□□□□ -1.72
UBE2D3-226ENST00000508635 AOX1Q06278 1338 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 UBE2Q2LH0YL09 131 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 EYA2O00167 538 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 NEMP1O14524 444 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 IPO8O15397 1037 aaKnown RBP4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 PRLP01236 227 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 FGFR2P21802 821 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 LSSP48449 732 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 KCNQ1P51787 676 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 RRADP55042 308 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 ALDH6A1Q02252 535 aaKnown RBP4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 NFATC3Q12968 1075 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 SPATS1Q496A3 300 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 ATP13A4Q4VNC1 1196 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 CAVIN4Q5BKX8 364 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 METTL24Q5JXM2 366 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 TTC38Q5R3I4 469 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 MFSD14BQ5SR56 506 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 SLFN12LQ6IEE8 588 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms