RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CBX3Q13185 183 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 MLECQ14165 292 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 MAPKAPK3Q16644 382 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 PGS1Q32NB8 556 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SH2D4BQ5SQS7 431 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 MCTP2Q6DN12 878 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 BNIPLQ7Z465 357 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SLC4A11Q8NBS3 891 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SPPL3Q8TCT6 385 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ACMSDQ8TDX5 336 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ZBTB9Q96C00 473 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 CALML4Q96GE6 196 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 GCOM2Q9BZD3 368 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 FOXP3Q9BZS1 431 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 PRDM13Q9H4Q3 707 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 TRAF6Q9Y4K3 522 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 CASKIN1Q8WXD9 1431 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 CTAGE15A4D2H0 777 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 LRRIQ4A6NIV6 560 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 L7N2F9 121 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 TAF4O00268 1085 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 SLC25A17O43808 307 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 OLFM2O95897 454 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CTAGE8P0CG41 777 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 USP11P51784 963 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 KPNA1P52294 538 aaPredicted RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 GABPB1Q06547 395 aaPredicted RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 TLR1Q15399 786 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 AKNAD1Q5T1N1 836 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ISLR2Q6UXK2 745 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 MAEAQ7L5Y9 396 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CTAGE6Q86UF2 777 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM160B2Q86V87 743 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 SPATA24Q86W54 205 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 RIOX2Q8IUF8 465 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CTAGE4Q8IX94 777 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 LRRN4CLQ8ND94 238 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 GOLGA5Q8TBA6 731 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 STT3BQ8TCJ2 826 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 DEPDC1BQ8WUY9 529 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 LMBR1Q8WVP7 490 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 RAPGEF5Q92565 580 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 KCNN1Q92952 543 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 MUL1Q969V5 352 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 DHX58Q96C10 678 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 FEM1CQ96JP0 617 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 STK33Q9BYT3 514 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 GSX2Q9BZM3 304 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 AP5M1Q9H0R1 490 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ZBTB40Q9NUA8 1239 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM86C1Q9NVL1 165 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 HSPBP1Q9NZL4 362 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 HMG20BQ9P0W2 317 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF215Q9UL58 517 aaPredicted RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 FNDC3AQ9Y2H6 1198 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ZKSCAN5Q9Y2L8 839 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ASB3Q9Y575 518 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 GAKO14976 1311 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 TTC41PQ6P2S7 1318 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 LCHNA4D1U4 455 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 AQP12BA6NM10 295 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 WDR64B1ANS9 1081 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 GTPBP1O00178 669 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ARHGAP6O43182 974 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 PEX11AO75192 247 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 HNRNPA1P09651 372 aaKnown RBP eCLIP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CSF2RAP15509 400 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 RFC4P35249 363 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ACAA2P42765 397 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 VPS41P49754 854 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CYP4F8P98187 520 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ALDH6A1Q02252 535 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 UBE3AQ05086 875 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 STK4Q13043 487 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 SUZ12Q15022 739 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 GRIK5Q16478 980 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CCDC40Q4G0X9 1142 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 AARDQ4LEZ3 155 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 BMP2KLQ5H9B9 411 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CAPRIN2Q6IMN6 1127 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CORO6Q6QEF8 472 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 B3GNT6Q6ZMB0 384 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 TAOK1Q7L7X3 1001 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 GLRX5Q86SX6 157 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 TTC7BQ86TV6 843 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 RBM12BQ8IXT5 1001 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 C10orf53Q8N6V4 93 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 TTC9Q92623 222 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 VPS33AQ96AX1 596 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 APIPQ96GX9 242 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 SLC9A7Q96T83 725 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 ITPAQ9BY32 194 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 MID1IP1Q9NPA3 183 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 IL20Q9NYY1 176 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 SUSD2Q9UGT4 822 aa8.06□□□□□ -1.12
PDGFRA-206ENST00000508170 CLEC4AQ9UMR7 237 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms