RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TBC1D10BQ4KMP7 808 aaPredicted RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 PABPC1LQ4VXU2 614 aaKnown RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 SEM1Q6ZVN7 128 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 FAM83AQ86UY5 434 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 ELOA2Q8IYF1 753 aaPredicted RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 BRIX1Q8TDN6 353 aaKnown RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 PMM1Q92871 262 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 BORCS6Q96GS4 357 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 LSM14BQ9BX40 385 aaKnown RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 XYLT2Q9H1B5 865 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 MRPL46Q9H2W6 279 aaKnown RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 SPON1Q9HCB6 807 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 CNNM1Q9NRU3 951 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 TPCN1Q9ULQ1 816 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 PJA2O43164 708 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 PHGDHO43175 533 aaKnown RBP7.37□□□□□ -1.23
HERC4-213ENST00000506515 MTHFD1P11586 935 aaKnown RBP7.37□□□□□ -1.23
HERC4-213ENST00000506515 PHKA1P46020 1223 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 FOXL1Q12952 345 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 ELAVL1Q15717 326 aaKnown RBP7.37□□□□□ -1.23
HERC4-213ENST00000506515 BMT2Q1RMZ1 405 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 DACT2Q5SW24 774 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 UBXN11Q5T124 520 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 MFSD5Q6N075 450 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 TCTN3Q6NUS6 607 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 LIMS2Q7Z4I7 341 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 FRMD5Q7Z6J6 570 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 FAM90A1Q86YD7 464 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 FUKQ8N0W3 1084 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 RNF169Q8NCN4 708 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 FBXO41Q8TF61 875 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 RPS6KC1Q96S38 1066 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 KRTAP4-12Q9BQ66 201 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 NAA15Q9BXJ9 866 aaKnown RBP7.37□□□□□ -1.23
HERC4-213ENST00000506515 PACSIN1Q9BY11 444 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 GNL3LQ9NVN8 582 aaKnown RBP7.37□□□□□ -1.23
HERC4-213ENST00000506515 ZFR2Q9UPR6 939 aaKnown RBP7.37□□□□□ -1.23
HERC4-213ENST00000506515 SH3BP1Q9Y3L3 701 aa7.37□□□□□ -1.23
HERC4-213ENST00000506515 PRR5-ARHGAP8B1AHC4 643 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 PLATP00750 562 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 SLC5A1P13866 664 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 PIK3CGP48736 1102 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 POLD3Q15054 466 aaPredicted RBP7.36□□□□□ -1.23
HERC4-213ENST00000506515 CCDC93Q567U6 631 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 ATXN7L2Q5T6C5 722 aaPredicted RBP7.36□□□□□ -1.23
HERC4-213ENST00000506515 APBB1IPQ7Z5R6 666 aaPredicted RBP7.36□□□□□ -1.23
HERC4-213ENST00000506515 SIAH1Q8IUQ4 282 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 D2HGDHQ8N465 521 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 MB21D1Q8N884 522 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 IL17RDQ8NFM7 739 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 IL31RAQ8NI17 732 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 TFAP2CQ92754 450 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 NDC1Q9BTX1 674 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 ZNF700Q9H0M5 742 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 SIDT1Q9NXL6 827 aaKnown RBP7.36□□□□□ -1.23
HERC4-213ENST00000506515 RTEL1Q9NZ71 1219 aa7.36□□□□□ -1.23
HERC4-213ENST00000506515 USP19O94966 1318 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 FOXS1O43638 330 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 PRICKLE3O43900 615 aaPredicted RBP7.35□□□□□ -1.23
HERC4-213ENST00000506515 MFAP3LO75121 409 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 RAD17O75943 681 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 POMCP01189 267 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 AMHP03971 560 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 GNAI3P08754 354 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 INHBBP09529 407 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 MYF5P13349 255 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 HK1P19367 917 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 SLC7A1P30825 629 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 GNAI1P63096 354 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 EXOSC9Q06265 439 aaKnown RBP7.35□□□□□ -1.23
HERC4-213ENST00000506515 OS9Q13438 667 aaPredicted RBP7.35□□□□□ -1.23
HERC4-213ENST00000506515 UBXN2BQ14CS0 331 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 GLB1LQ6UWU2 654 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 DOK3Q7L591 496 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 CIR1Q86X95 450 aaPredicted RBP7.35□□□□□ -1.23
HERC4-213ENST00000506515 ZFP28Q8NHY6 868 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 ST8SIA2Q92186 375 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 LRRC27Q9C0I9 530 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 NUP62CLQ9H1M0 184 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 GSTO2Q9H4Y5 243 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 FBXO34Q9NWN3 711 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 POGKQ9P215 609 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 PHTF1Q9UMS5 762 aa7.35□□□□□ -1.23
HERC4-213ENST00000506515 URB2Q14146 1524 aaKnown RBP7.34□□□□□ -1.23
HERC4-213ENST00000506515 GPR42O15529 346 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 MATN4O95460 622 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 NPR1P16066 1061 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 HDCP19113 662 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 SLC6A4P31645 630 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 KCNJ5P48544 419 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 SOX8P57073 446 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 NOMO3P69849 1222 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 LONRF1Q17RB8 773 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 EFCAB12Q6NXP0 572 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 C11orf96Q7Z7L8 435 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 SAMD3Q8N6K7 520 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 NLGN4YQ8NFZ3 816 aaPredicted RBP7.34□□□□□ -1.23
HERC4-213ENST00000506515 ANKS1AQ92625 1134 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 APIPQ96GX9 242 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 SLC39A13Q96H72 371 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms