RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PNPOQ9NVS9 261 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 FAM30AQ9NZY2 134 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 TESMINQ9Y4I5 508 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 PCDHA1Q9Y5I3 950 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 FRMPD2Q68DX3 1309 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 A0A088AWK7 358 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 A6NNZ2 444 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 B3GALT2O43825 422 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 ITGB1P05556 798 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 ZNF20P17024 532 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 ACRV1P26436 265 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 PRDX5P30044 214 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 APOBEC3AP31941 199 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 NHLH2Q02577 135 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 SPATS1Q496A3 300 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 USP39Q53GS9 565 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 SPDYAQ5MJ70 313 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 METRNLQ641Q3 311 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 NPNTQ6UXI9 565 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 PRRT2Q7Z6L0 340 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 DAAM2Q86T65 1068 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 PPP1R3BQ86XI6 285 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 COL23A1Q86Y22 540 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 NLGN4YQ8NFZ3 816 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 TIFAQ96CG3 184 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 SLC35A4Q96G79 324 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 CDK5RAP1Q96SZ6 601 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 C1QTNF3Q9BXJ4 246 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 B3GNT5Q9BYG0 378 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 SLAMF7Q9NQ25 335 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 PRDM11Q9NQV5 511 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 STAP2Q9UGK3 403 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 EIF2B4Q9UI10 523 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 SLC45A2Q9UMX9 530 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 SORCS3Q9UPU3 1222 aa5.15□□□□□ -1.59
TOPBP1-204ENST00000505804 CDHR4A6H8M9 788 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 KIF3BO15066 747 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 ZNF185O15231 689 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 SLC43A1O75387 559 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 FTH1P19P0C7X4 201 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 ALAS1P13196 640 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 PHKA1P46020 1223 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 RNASE9P60153 205 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 GBX1Q14549 363 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 CCDC93Q567U6 631 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 UTP14CQ5TAP6 766 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 TSHZ3Q63HK5 1081 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 FAM90A1Q86YD7 464 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 TMPRSS6Q8IU80 811 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 C1orf210Q8IVY1 113 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 FITM2Q8N6M3 262 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 IL17DQ8TAD2 202 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 TBC1D15Q8TC07 691 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 TNPO1Q92973 898 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 FAM167AQ96KS9 214 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 NT5C1BQ96P26 610 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 PACSIN1Q9BY11 444 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 MRPL46Q9H2W6 279 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 WDCPQ9H6R7 721 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 SIDT1Q9NXL6 827 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 FEZ2Q9UHY8 353 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 TSC22D4Q9Y3Q8 395 aa5.14□□□□□ -1.59
TOPBP1-204ENST00000505804 PRSS29PA6NIE9 313 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 BTBD11A6QL63 1104 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 GRXCR1A8MXD5 290 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 FAM20BO75063 409 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 HAUS5O94927 633 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 AGFG2O95081 481 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 SCAF4O95104 1147 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 AHSGP02765 367 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 IL12RB1P42701 662 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 AGFG1P52594 562 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 USP14P54578 494 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 RAB1AP62820 205 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 NOMO3P69849 1222 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 FGL2Q14314 439 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 ANO6Q4KMQ2 910 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 NOMO2Q5JPE7 1267 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 FAM102AQ5T9C2 384 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 CHST15Q7LFX5 561 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 DGKHQ86XP1 1220 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 ZFPM1Q8IX07 1006 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 CELF5Q8N6W0 485 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 CPT1CQ8TCG5 803 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 CCDC136Q96JN2 1154 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 NEU1Q99519 415 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 TEX101Q9BY14 249 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 TMEM60Q9H2L4 133 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 BRD9Q9H8M2 597 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 FAM204AQ9H8W3 233 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 GNL3LQ9NVN8 582 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 GEMIN8Q9NWZ8 242 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 TRPM5Q9NZQ8 1165 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 JKAMPQ9P055 326 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 CPA4Q9UI42 421 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 PCDHA6Q9UN73 950 aa5.13□□□□□ -1.59
TOPBP1-204ENST00000505804 USP15Q9Y4E8 981 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms