RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 UBR7Q8N806 425 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 AKT3Q9Y243 479 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 UMODL1Q5DID0 1318 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 MGAMO43451 1857 aa22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 DDX3YO15523 660 aaKnown RBP22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 PLA2G4AP47712 749 aa22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 TNFAIP2Q03169 654 aa22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 GRIK4Q16099 956 aa22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 GLE1Q53GS7 698 aaKnown RBP22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 CDR2LQ86X02 465 aaPredicted RBP22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 CEP120Q8N960 986 aa22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 HDAC7Q8WUI4 952 aa22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 DMGDHQ9UI17 866 aaKnown RBP22.88■■□□□ 1.25
UBE2D3-216ENST00000503742 GPR25O00155 361 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 VTNP04004 478 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 FAM212AQ96EL1 285 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 GNEQ9Y223 722 aaKnown RBP22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 KAT6AQ92794 2004 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 CEP104O60308 925 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 TAF1CQ15572 869 aaPredicted RBP22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 CCNI2Q6ZMN8 369 aaPredicted RBP22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 EFCAB13Q8IY85 973 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 USP6NLQ92738 828 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.87■■□□□ 1.255e-7■■■■□ 24.9
UBE2D3-216ENST00000503742 IMPG2Q9BZV3 1241 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 PCDHB4Q9Y5E5 795 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 ALG6Q9Y672 507 aa22.87■■□□□ 1.25
UBE2D3-216ENST00000503742 ZMYND10O75800 440 aa22.86■■□□□ 1.25
UBE2D3-216ENST00000503742 RNASE9P60153 205 aaKnown RBP22.86■■□□□ 1.25
UBE2D3-216ENST00000503742 TMEM132AQ24JP5 1023 aa22.86■■□□□ 1.25
UBE2D3-216ENST00000503742 C17orf99Q6UX52 265 aa22.86■■□□□ 1.25
UBE2D3-216ENST00000503742 FLRT1Q9NZU1 646 aa22.86■■□□□ 1.25
UBE2D3-216ENST00000503742 A6NJR5 290 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 PGRMC1O00264 195 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 ATMINO43313 823 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 ZEB2O60315 1214 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 CSDE1O75534 798 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 IL18RAPO95256 599 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 CYP1A1P04798 512 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 MCF2P10911 925 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 ZNF132P52740 706 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 MYL6P60660 151 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 POU5F1Q01860 360 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 PRAMEF19Q5SWL8 479 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 C8orf74Q6P047 294 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 TMEM270Q6UE05 265 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 HDXQ7Z353 690 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 TMEM192Q8IY95 271 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 KIAA0319LQ8IZA0 1049 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 ZNF653Q96CK0 615 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 PDZD7Q9H5P4 517 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 UVRAGQ9P2Y5 699 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 TTC7AQ9ULT0 858 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 ZNF865P0CJ78 1059 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 OSTNP61366 133 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 SGSM1Q2NKQ1 1148 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 DCAF12L1Q5VU92 463 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 SAPCD2Q86UD0 394 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 RBBP8NLQ8NC74 664 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 RPS6KC1Q96S38 1066 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 PPP1R16BQ96T49 567 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 NUP85Q9BW27 656 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 RPF1Q9H9Y2 349 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 STIM2Q9P246 746 aa22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 CHORDC1Q9UHD1 332 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 NOC2LQ9Y3T9 749 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-216ENST00000503742 CXCL8P10145 99 aa22.84■■□□□ 1.25
UBE2D3-216ENST00000503742 TFAMQ00059 246 aaKnown RBP22.84■■□□□ 1.25
UBE2D3-216ENST00000503742 MAP9Q49MG5 647 aa22.84■■□□□ 1.25
UBE2D3-216ENST00000503742 SMYD5Q6GMV2 418 aa22.84■■□□□ 1.25
UBE2D3-216ENST00000503742 RGMBQ6NW40 437 aa22.84■■□□□ 1.25
UBE2D3-216ENST00000503742 ZNF564Q8TBZ8 553 aaPredicted RBP22.84■■□□□ 1.25
UBE2D3-216ENST00000503742 UBXN6Q9BZV1 441 aa22.84■■□□□ 1.25
UBE2D3-216ENST00000503742 RRN3P2A6NIE6 340 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 DYNC1LI2O43237 492 aaPredicted RBP22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 TMEM191BP0C7N4 346 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 MYBL2P10244 700 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 ARF4P18085 180 aaPredicted RBP22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 SLC7A5Q01650 507 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 CENPCQ03188 943 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 IFNL1Q8IU54 200 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 MCOLN2Q8IZK6 566 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 ANKRD36BP1Q96IX9 119 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 NIF3L1Q9GZT8 377 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 XYLT2Q9H1B5 865 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 CARD9Q9H257 536 aa22.83■■□□□ 1.25
UBE2D3-216ENST00000503742 MIF4GDA9UHW6 222 aaKnown RBP22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 MEFVO15553 781 aaPredicted RBP22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 TNNC2P02585 160 aa22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 STAG3L1P0CL83 205 aa22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 GNA15P30679 374 aa22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 TNNC1P63316 161 aa22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 MRPS25P82663 173 aaKnown RBP22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 DMTNQ08495 405 aa22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 TRIM72Q6ZMU5 477 aa22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 ZNF410Q86VK4 478 aa22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 AVENQ9NQS1 362 aaPredicted RBP22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 CNOT8Q9UFF9 292 aaKnown RBP22.83■■□□□ 1.24
UBE2D3-216ENST00000503742 ECM2O94769 699 aaPredicted RBP22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 F2P00734 622 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms