RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PCIF1Q9H4Z3 704 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 C2CD2Q9Y426 696 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 IL18RAPO95256 599 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 GLP2RO95838 553 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 NFICP08651 508 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 KCNA5P22460 613 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 IGFBP6P24592 240 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 CA8P35219 290 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 UBE2HP62256 183 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 PNOCQ13519 176 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 LEXMQ3ZCV2 418 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 SPATA1Q5VX52 437 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 KIAA1841Q6NSI8 718 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 TMEM184AQ6ZMB5 413 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 CLEC17AQ6ZS10 378 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 C12orf56Q8IXR9 622 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 VN1R2Q8NFZ6 395 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 GOLGA5Q8TBA6 731 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 ASB2Q96Q27 587 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 EMILIN2Q9BXX0 1053 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 RXFP1Q9HBX9 757 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 RBAKQ9NYW8 714 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 HSPBP1Q9NZL4 362 aa19.79■□□□□ 0.76
PDLIM7-209ENST00000503346 GOLGA8IPA6NC78 632 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 GOLGA8JA6NMD2 632 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 TRAPPC3O43617 180 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 TBX10O75333 385 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 DLX2Q07687 328 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 TMEM132DQ14C87 1099 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 FAM171A1Q5VUB5 890 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 NT5DC4Q86YG4 428 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 BEST2Q8NFU1 509 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 SPATA20Q8TB22 786 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 FBXL18Q96ME1 805 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 KLHL5Q96PQ7 755 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 TTPALQ9BTX7 342 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 KIAA1586Q9HCI6 787 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 HOOK1Q9UJC3 728 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 XIRP2A4UGR9 3374 aa19.78■□□□□ 0.76
PDLIM7-209ENST00000503346 C2CD2LO14523 706 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 KINO60870 393 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 KIF20AO95235 890 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 CNPP09543 421 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 FGFR3P22607 806 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 NDUFV1P49821 464 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 RTP2Q5QGT7 225 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 EP400NLQ6ZTU2 488 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 PPFIBP1Q86W92 1011 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 TMEM174Q8WUU8 243 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 RIN2Q8WYP3 895 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 B3GALT6Q96L58 329 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 GSDMAQ96QA5 445 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 KCTD10Q9H3F6 313 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 RMND1Q9NWS8 449 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 CLEC1BQ9P126 229 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 HCFC2Q9Y5Z7 792 aa19.77■□□□□ 0.76
PDLIM7-209ENST00000503346 ZNF233A6NK53 670 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 H3BQ06 376 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 CLIC2O15247 247 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 SMC2O95347 1197 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 SRGAP2BP0DMP2 458 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 BRCC3P46736 316 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 GUCY2FP51841 1108 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 WNT7BP56706 349 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 RBM10P98175 930 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 CREMQ03060 361 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 CBWD2Q8IUF1 395 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 EFCAB13Q8IY85 973 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 XXYLT1Q8NBI6 393 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 SLC22A17Q8WUG5 538 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 PIK3R5Q8WYR1 880 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 MSLNLQ96KJ4 702 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 FNIP2Q9P278 1114 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 NUB1Q9Y5A7 615 aa19.76■□□□□ 0.75
PDLIM7-209ENST00000503346 UNC80Q8N2C7 3258 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 CITO14578 2027 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 PDXKO00764 312 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 TEX28O15482 410 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 PRPF40AO75400 957 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 TJAP1Q5JTD0 557 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 PDXDC1Q6P996 788 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 CEP57Q86XR8 500 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 SLC9A9Q8IVB4 645 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 TMEM130Q8N3G9 435 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 GUF1Q8N442 669 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 LNX1Q8TBB1 728 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 CASP10Q92851 521 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 SUSD3Q96L08 255 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 BARX2Q9UMQ3 279 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 PCDHA5Q9Y5H7 936 aa19.75■□□□□ 0.75
PDLIM7-209ENST00000503346 ANO9A1A5B4 782 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 I3L4J1 428 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 PIRO00625 290 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 SYN3O14994 580 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 C1RP00736 705 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 ADH1AP07327 375 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 PAX3P23760 479 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms