RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PDIA3P30101 505 aaKnown RBP18.2■□□□□ 0.5
VIM-208ENST00000497849 SLC8B1Q6J4K2 584 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 ANKS3Q6ZW76 656 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 KRT25Q7Z3Z0 450 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 C3orf58Q8NDZ4 430 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 DEPDC1BQ8WUY9 529 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 PRIMPOLQ96LW4 560 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 AIFM3Q96NN9 605 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 ARRDC1-AS1Q9H2J1 176 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 FZD8Q9H461 694 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 PDZD7Q9H5P4 517 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 WDFY3Q8IZQ1 3526 aa18.2■□□□□ 0.5
VIM-208ENST00000497849 ZNF197O14709 1029 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 AXIN1O15169 862 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 B3GAT3O94766 335 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 KCNK5O95279 499 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 SEC24AO95486 1093 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 ZNF806P0C7X5 589 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 CLCNKBP51801 687 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 MLLT6P55198 1093 aaPredicted RBP18.19■□□□□ 0.5
VIM-208ENST00000497849 EVCP57679 992 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 STPG1Q5TH74 334 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 CEP68Q76N32 757 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 NOSTRINQ8IVI9 506 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 KCNB2Q92953 911 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
VIM-208ENST00000497849 POLR3FQ9H1D9 316 aaPredicted RBP18.19■□□□□ 0.5
VIM-208ENST00000497849 PRMT7Q9NVM4 692 aaPredicted RBP18.19■□□□□ 0.5
VIM-208ENST00000497849 ZMIZ1Q9ULJ6 1067 aa18.19■□□□□ 0.5
VIM-208ENST00000497849 PRRG1O14668 218 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 ZNF263O14978 683 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 LYPLA2O95372 231 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 ATF2P15336 505 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 BRCC3P46736 316 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 SOX9P48436 509 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 RBM25P49756 843 aaKnown RBP18.18■□□□□ 0.5
VIM-208ENST00000497849 RARRES1P49788 294 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 LRRC32Q14392 662 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 ACAP1Q15027 740 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 UPP1Q16831 310 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 FAM187BQ17R55 369 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 GALNT17Q6IS24 598 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 PDZD4Q76G19 769 aaPredicted RBP18.18■□□□□ 0.5
VIM-208ENST00000497849 NEK8Q86SG6 692 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 MFSD6LQ8IWD5 586 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 TRIM22Q8IYM9 498 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 TCEAL8Q8IYN2 117 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 HS6ST3Q8IZP7 471 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 C12orf50Q8NA57 414 aaPredicted RBP18.18■□□□□ 0.5
VIM-208ENST00000497849 PPP1R10Q96QC0 940 aaKnown RBP18.18■□□□□ 0.5
VIM-208ENST00000497849 HSD17B14Q9BPX1 270 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 LSM14BQ9BX40 385 aaKnown RBP18.18■□□□□ 0.5
VIM-208ENST00000497849 TRPV4Q9HBA0 871 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 GPRC5CQ9NQ84 441 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 ANKEF1Q9NU02 776 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 USP20Q9Y2K6 914 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 INSL5Q9Y5Q6 135 aa18.18■□□□□ 0.5
VIM-208ENST00000497849 LRRIQ4A6NIV6 560 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 CCNT1O60563 726 aaKnown RBP18.17■□□□□ 0.5
VIM-208ENST00000497849 DEXIO95424 95 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 EDN1P05305 212 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 GCFC2P16383 781 aaKnown RBP18.17■□□□□ 0.5
VIM-208ENST00000497849 GJA1P17302 382 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 HOXA6P31267 233 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 ELF1P32519 619 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 SSRP1Q08945 709 aaKnown RBP18.17■□□□□ 0.5
VIM-208ENST00000497849 GLRA4Q5JXX5 417 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 CDCA2Q69YH5 1023 aaPredicted RBP18.17■□□□□ 0.5
VIM-208ENST00000497849 TXNDC11Q6PKC3 985 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 UNQ6494/PRO21346Q6UXR6 183 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 WDR5BQ86VZ2 330 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 ZSCAN18Q8TBC5 510 aaPredicted RBP18.17■□□□□ 0.5
VIM-208ENST00000497849 RSPRY1Q96DX4 576 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 EIF2AK1Q9BQI3 630 aaKnown RBP18.17■□□□□ 0.5
VIM-208ENST00000497849 CYP4F11Q9HBI6 524 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 GOLGA2P5Q9HBQ8 144 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 KCNJ14Q9UNX9 436 aa18.17■□□□□ 0.5
VIM-208ENST00000497849 PKD1L2Q7Z442 2459 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 A0A087WWV3 80 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 SLC38A8A6NNN8 435 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 HEPACAM2A8MVW5 462 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 N4BP3O15049 544 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 EPN2O95208 641 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 RAP1GAPP47736 663 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 CYP4A22Q5TCH4 519 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 EEF1DP3Q658K8 133 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 MSANTD3Q96H12 275 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 LOXL4Q96JB6 756 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 CEP72Q9P209 647 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 GDAQ9Y2T3 454 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 SNX14Q9Y5W7 946 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 EML5Q05BV3 1969 aa18.16■□□□□ 0.5
VIM-208ENST00000497849 CCDC194A0A1B0GVG4 234 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 TRAPPC3O43617 180 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 MARCH6O60337 910 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 PRKCBP05771 671 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 EPHA5P54756 1037 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms