RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ERVFC1P60507 584 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 TFAMQ00059 246 aaKnown RBP13.51□□□□□ -0.25
TRA2A-209ENST00000494255 CYP24A1Q07973 514 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 ELAVL2Q12926 359 aaKnown RBP13.51□□□□□ -0.25
TRA2A-209ENST00000494255 CAMK1Q14012 370 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 SMC1AQ14683 1233 aaKnown RBP13.51□□□□□ -0.25
TRA2A-209ENST00000494255 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 SPATA1Q5VX52 437 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 PLPP4Q5VZY2 271 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 CEP135Q66GS9 1140 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 KLHL10Q6JEL2 608 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 MAFAQ8NHW3 353 aaPredicted RBP13.51□□□□□ -0.25
TRA2A-209ENST00000494255 TMEM174Q8WUU8 243 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 DHTKD1Q96HY7 919 aaPredicted RBP13.51□□□□□ -0.25
TRA2A-209ENST00000494255 HERC2P3Q9BVR0 1158 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
TRA2A-209ENST00000494255 FSCN2O14926 492 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 SOD2P04179 222 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 URODP06132 367 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 TMEM191BP0C7N4 346 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 PTMSP20962 102 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 CCNE1P24864 410 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 LRPAP1P30533 357 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 PSMD6Q15008 389 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 CCDC85BQ15834 202 aaPredicted RBP13.5□□□□□ -0.25
TRA2A-209ENST00000494255 ZCWPW2Q504Y3 356 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 CENPPQ6IPU0 288 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 KIAA1841Q6NSI8 718 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 EFCAB13Q8IY85 973 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 PPM1EQ8WY54 764 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 ANKRD36BP1Q96IX9 119 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 ZBP1Q9H171 429 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 DPP3Q9NY33 737 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 ATG2AQ2TAZ0 1938 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 CXCL14O95715 111 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 TNNC2P02585 160 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 CTSAP10619 480 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 IRS1P35568 1242 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 GLUD2P49448 558 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 GUCY2FP51841 1108 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 WNT7BP56706 349 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 ADAM9Q13443 819 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 USP41Q3LFD5 358 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 TCEAL5Q5H9L2 206 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 MFSD14AQ96MC6 490 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 GPR62Q9BZJ7 368 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 MRPL17Q9NRX2 175 aaKnown RBP13.5□□□□□ -0.25
TRA2A-209ENST00000494255 SSX2IPQ9Y2D8 614 aa13.5□□□□□ -0.25
TRA2A-209ENST00000494255 R3HCC1Q9Y3T6 440 aaKnown RBP13.5□□□□□ -0.25
TRA2A-209ENST00000494255 CHD7Q9P2D1 2997 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.49□□□□□ -0.25
TRA2A-209ENST00000494255 BICDL2A1A5D9 508 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 CETN3O15182 167 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 DLATP10515 647 aaKnown RBP13.49□□□□□ -0.25
TRA2A-209ENST00000494255 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
TRA2A-209ENST00000494255 TNNI1P19237 187 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 BMP6P22004 513 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 SKIV2LQ15477 1246 aaKnown RBP13.49□□□□□ -0.25
TRA2A-209ENST00000494255 FAM171A1Q5VUB5 890 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 USP37Q86T82 979 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 CEP57Q86XR8 500 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 C3orf58Q8NDZ4 430 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 CCDC127Q96BQ5 260 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 CGRRF1Q99675 332 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 INTS13Q9NVM9 706 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 CTNND2Q9UQB3 1225 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
TRA2A-209ENST00000494255 PRRC2BQ5JSZ5 2229 aaKnown RBP13.49□□□□□ -0.25
TRA2A-209ENST00000494255 C2CD2LO14523 706 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 MAPK13O15264 365 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 EPB41P11171 864 aaKnown RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 KRT13P13646 458 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 PAX3P23760 479 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 BRCC3P46736 316 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 CASP4P49662 377 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 FKBP3Q00688 224 aaKnown RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 PAK1Q13153 545 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 DUOXA2Q1HG44 320 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 CCDC183Q5T5S1 534 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 TAS1R1Q7RTX1 841 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 FAM186BQ8IYM0 893 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 MRPL43Q8N983 215 aaKnown RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 MLKLQ8NB16 471 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 AUTS2Q8WXX7 1259 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
TRA2A-209ENST00000494255 TTPALQ9BTX7 342 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 MTMR12Q9C0I1 747 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 TLE6Q9H808 572 aa13.48□□□□□ -0.25
TRA2A-209ENST00000494255 ITGA11Q9UKX5 1188 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms