RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 FBXO16Q8IX29 292 aaPredicted RBP14.74□□□□□ -0.05
VCP-207ENST00000493886 CELF4Q9BZC1 486 aaKnown RBP14.74□□□□□ -0.05
VCP-207ENST00000493886 CARD9Q9H257 536 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 CHORDC1Q9UHD1 332 aaPredicted RBP14.74□□□□□ -0.05
VCP-207ENST00000493886 AMACRQ9UHK6 382 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 ADGRA2Q96PE1 1338 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 ATMINO43313 823 aaPredicted RBP14.74□□□□□ -0.05
VCP-207ENST00000493886 LGR5O75473 907 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 CALRP27797 417 aaKnown RBP14.74□□□□□ -0.05
VCP-207ENST00000493886 IER5Q5VY09 327 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 PPM1EQ8WY54 764 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 MCM3APO60318 1980 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 SART1O43290 800 aaKnown RBP14.73□□□□□ -0.05
VCP-207ENST00000493886 MTA2O94776 668 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 FGGP02679 453 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 FLT3P36888 993 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 CCDC97Q96F63 343 aaPredicted RBP14.73□□□□□ -0.05
VCP-207ENST00000493886 DPH5Q9H2P9 285 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 MROH8Q9H579 483 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 ZNFX1Q9P2E3 1918 aaKnown RBP14.73□□□□□ -0.05
VCP-207ENST00000493886 GRIN3BO60391 1043 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 VNN1O95497 513 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 CYP1A2P05177 515 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 GJA5P36382 358 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 ATP8B4Q8TF62 1192 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 ZNF653Q96CK0 615 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 SPATA33Q96N06 139 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 CGRRF1Q99675 332 aa14.73□□□□□ -0.05
VCP-207ENST00000493886 TMEM110-MUSTN1A8MSY1 372 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 CALCAP01258 141 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 HARSP12081 509 aaKnown RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 EFNA5P52803 228 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 GSCP56915 257 aaPredicted RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 MESDQ14696 234 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 EAPPQ56P03 285 aaPredicted RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 CCDC62Q6P9F0 684 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 ZPBP2Q6X784 338 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 PLPPR4Q7Z2D5 763 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 EFCAB13Q8IY85 973 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 TCP11Q8WWU5 503 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 ALG3Q92685 438 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 NUP85Q9BW27 656 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 GTF3C4Q9UKN8 822 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 CNTNAP2Q9UHC6 1331 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 TTLL13PA6NNM8 815 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 MIF4GDA9UHW6 222 aaKnown RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 ZBTB42B2RXF5 422 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 LSP1P33241 339 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 SEZ6Q53EL9 994 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 FBXW10Q5XX13 1052 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 SPOPLQ6IQ16 392 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 ACAD10Q6JQN1 1059 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 ZNF564Q8TBZ8 553 aaPredicted RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 MORC4Q8TE76 937 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 UBLCP1Q8WVY7 318 aaPredicted RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 COPS5Q92905 334 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 RPS6KC1Q96S38 1066 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 TAF1DQ9H5J8 278 aaPredicted RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 CLDN3O15551 220 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 TTI1O43156 1089 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 DAPK3O43293 454 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 GAS2O43903 313 aaKnown RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 MSCO60682 206 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 SRGAP2CP0DJJ0 459 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 ECHS1P30084 290 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 HSD17B3P37058 310 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 LAMTOR4Q0VGL1 99 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 ZNF211Q13398 564 aaPredicted RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 SNAPC2Q13487 334 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 PLCB4Q15147 1175 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 CLEC16AQ2KHT3 1053 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 ANKRD23Q86SG2 305 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 LRRC71Q8N4P6 559 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 KAT2BQ92831 832 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 MRPL4Q9BYD3 311 aaKnown RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 CCDC113Q9H0I3 377 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 SLITRK6Q9H5Y7 841 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 PPANQ9NQ55 473 aaKnown RBP14.72□□□□□ -0.05
VCP-207ENST00000493886 TRPC6Q9Y210 931 aa14.72□□□□□ -0.05
VCP-207ENST00000493886 IGKV6-21A0A0C4DH24 114 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 COMTP21964 271 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 PAX7P23759 505 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 SKOR1P84550 965 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 MXD4Q14582 209 aaPredicted RBP14.71□□□□□ -0.05
VCP-207ENST00000493886 LDLRAD1Q5T700 205 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 CDCA2Q69YH5 1023 aaPredicted RBP14.71□□□□□ -0.05
VCP-207ENST00000493886 UBL4BQ8N7F7 174 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 RNF149Q8NC42 400 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 APOBEC3GQ9HC16 384 aaKnown RBP14.71□□□□□ -0.05
VCP-207ENST00000493886 NR2E1Q9Y466 385 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 PCDHB2Q9Y5E7 798 aa14.71□□□□□ -0.05
VCP-207ENST00000493886 ERLIN2O94905 339 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 TXNP10599 105 aaKnown RBP14.71□□□□□ -0.06
VCP-207ENST00000493886 CTNNA1P35221 906 aaKnown RBP14.71□□□□□ -0.06
VCP-207ENST00000493886 UAP1Q16222 522 aaPredicted RBP14.71□□□□□ -0.06
VCP-207ENST00000493886 TMEM63BQ5T3F8 832 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 NAIF1Q69YI7 327 aaPredicted RBP14.71□□□□□ -0.06
VCP-207ENST00000493886 EXOC8Q8IYI6 725 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 SHCBP1Q8NEM2 672 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms