RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 FAM193BQ96PV7 902 aaPredicted RBP13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 SLC28A3Q9HAS3 691 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 SAMSN1Q9NSI8 373 aaKnown RBP13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 SIX4Q9UIU6 781 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 ANK1P16157 1881 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 C5orf67F2Z3F1 127 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 PODXLO00592 558 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 KIF4AO95239 1232 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 CLCNKBP51801 687 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 IQCB1Q15051 598 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 UPP1Q16831 310 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 CCDC40Q4G0X9 1142 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 HSP90AA4PQ58FG1 418 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 FRMD5Q7Z6J6 570 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 NT5DC4Q86YG4 428 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 DHX40Q8IX18 779 aaKnown RBP13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 AOPEPQ8N6M6 819 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 HSD3B7Q9H2F3 369 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 DPP3Q9NY33 737 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 NFE2L3Q9Y4A8 694 aa13.1□□□□□ -0.31
RHBDF1-211ENST00000493647 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 CHD9Q3L8U1 2897 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 RFXAPO00287 272 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 CITO14578 2027 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 SPTLC1O15269 473 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 EFEMP2O95967 443 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 ALDH2P05091 517 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 KRT13P13646 458 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 TNNI1P19237 187 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 ALDH7A1P49419 539 aaKnown RBP13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 ZNF165P49910 485 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 MYL5Q02045 173 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 ENPEPQ07075 957 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 TPD52L1Q16890 204 aaPredicted RBP13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 DUOXA2Q1HG44 320 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 CDKAL1Q5VV42 579 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 TDRD10Q5VZ19 366 aaKnown RBP13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 C9orf57Q5W0N0 161 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 TRAPPC11Q7Z392 1133 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 TRIM59Q8IWR1 403 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 ARNTL2Q8WYA1 636 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 SLC35C1Q96A29 364 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 UROC1Q96N76 676 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 SAMD11Q96NU1 681 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 THAP9Q9H5L6 903 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 ZNF576Q9H609 170 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 FANCLQ9NW38 375 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 RWDD3Q9Y3V2 267 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 KIAA1671Q9BY89 1806 aa13.09□□□□□ -0.31
RHBDF1-211ENST00000493647 TMEM189-UBE2V1I3L0A0 370 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 PIRO00625 290 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 GRM6O15303 877 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 XPOTO43592 962 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 FGF18O76093 207 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 VNN1O95497 513 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 GNA14O95837 355 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 TNNC2P02585 160 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 ITGB3P05106 788 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 DNAJB1P25685 340 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 POLR2BP30876 1174 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 RPL9P32969 192 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 BRCC3P46736 316 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 GCLMP48507 274 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 ZNF445P59923 1031 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 DCLRE1AQ6PJP8 1040 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 SV2AQ7L0J3 742 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 FBXO22Q8NEZ5 403 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 SPPL3Q8TCT6 385 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 ANKRD36BP1Q96IX9 119 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 COLEC11Q9BWP8 271 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 PLVAPQ9BX97 442 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 AAASQ9NRG9 546 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 PCDHB12Q9Y5F1 795 aa13.08□□□□□ -0.32
RHBDF1-211ENST00000493647 LAMA3Q16787 3333 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms