RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 MYBPC2Q14324 1141 aa18.26■□□□□ 0.51
RER1-208ENST00000493207 CCDC183Q5T5S1 534 aa18.26■□□□□ 0.51
RER1-208ENST00000493207 SPATA1Q5VX52 437 aa18.26■□□□□ 0.51
RER1-208ENST00000493207 MICALL1Q8N3F8 863 aa18.26■□□□□ 0.51
RER1-208ENST00000493207 C3orf58Q8NDZ4 430 aa18.26■□□□□ 0.51
RER1-208ENST00000493207 NELFBQ8WX92 580 aa18.26■□□□□ 0.51
RER1-208ENST00000493207 DDX27Q96GQ7 796 aaKnown RBP18.26■□□□□ 0.51
RER1-208ENST00000493207 TLR9Q9NR96 1032 aa18.26■□□□□ 0.51
RER1-208ENST00000493207 B3GAT3O94766 335 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 PTMSP20962 102 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 RPL9P32969 192 aaKnown RBP18.25■□□□□ 0.51
RER1-208ENST00000493207 ERVFC1P60507 584 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 LRRC63Q05C16 580 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 PSMD6Q15008 389 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 SURF1Q15526 300 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 LMBRD2Q68DH5 695 aaPredicted RBP18.25■□□□□ 0.51
RER1-208ENST00000493207 DCLRE1AQ6PJP8 1040 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 NT5DC4Q86YG4 428 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 VPS52Q8N1B4 723 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 CCDC127Q96BQ5 260 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 EEF2KMTQ96G04 330 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 FAM84AQ96KN4 292 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 MFSD14AQ96MC6 490 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 TCF25Q9BQ70 676 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 LMCD1Q9NZU5 365 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 TMEM63CQ9P1W3 806 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 PCDHGC5Q9Y5F6 944 aa18.25■□□□□ 0.51
RER1-208ENST00000493207 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.25■□□□□ 0.51
RER1-208ENST00000493207 PTPRJQ12913 1337 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 TMEM189-UBE2V1I3L0A0 370 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 AKAP3O75969 853 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 DLATP10515 647 aaKnown RBP18.24■□□□□ 0.51
RER1-208ENST00000493207 POU3F3P20264 500 aaPredicted RBP18.24■□□□□ 0.51
RER1-208ENST00000493207 LRPAP1P30533 357 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 IRS1P35568 1242 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 NLRP12P59046 1061 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 PAK1Q13153 545 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 PLPP4Q5VZY2 271 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 CAVIN1Q6NZI2 390 aaKnown RBP18.24■□□□□ 0.51
RER1-208ENST00000493207 FUT10Q6P4F1 479 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 RBM43Q6ZSC3 357 aaKnown RBP18.24■□□□□ 0.51
RER1-208ENST00000493207 TAS1R1Q7RTX1 841 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 TMC7Q7Z402 723 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 MICAL1Q8TDZ2 1067 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 CACTINQ8WUQ7 758 aaKnown RBP18.24■□□□□ 0.51
RER1-208ENST00000493207 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 POP1Q99575 1024 aaKnown RBP18.24■□□□□ 0.51
RER1-208ENST00000493207 GPR62Q9BZJ7 368 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 MTMR12Q9C0I1 747 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 ZBP1Q9H171 429 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 DPP3Q9NY33 737 aa18.24■□□□□ 0.51
RER1-208ENST00000493207 SF3B1O75533 1304 aaKnown RBP eCLIP18.23■□□□□ 0.515e-9■■■■■ 47.1
RER1-208ENST00000493207 BICDL2A1A5D9 508 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 FSCN2O14926 492 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 CETN3O15182 167 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 EFEMP2O95967 443 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 SOD2P04179 222 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 TMEM191BP0C7N4 346 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 TNNI1P19237 187 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 CA8P35219 290 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 STX17P56962 302 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 CD300LGQ6UXG3 332 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 WDR49Q8IV35 697 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 FAM186BQ8IYM0 893 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 MLKLQ8NB16 471 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 OR5B17Q8NGF7 314 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 ANKRD36BP1Q96IX9 119 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 CGRRF1Q99675 332 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 HERC2P3Q9BVR0 1158 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 INTS13Q9NVM9 706 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 STK39Q9UEW8 545 aa18.23■□□□□ 0.51
RER1-208ENST00000493207 VWA8A3KMH1 1905 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 PPEF2O14830 753 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 MAPK13O15264 365 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 TNNC2P02585 160 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 PSMC2P35998 433 aaKnown RBP18.22■□□□□ 0.51
RER1-208ENST00000493207 BRCC3P46736 316 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 FKBP3Q00688 224 aaKnown RBP18.22■□□□□ 0.51
RER1-208ENST00000493207 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
RER1-208ENST00000493207 CCDC85BQ15834 202 aaPredicted RBP18.22■□□□□ 0.51
RER1-208ENST00000493207 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 TIGD5Q53EQ6 642 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 C9orf57Q5W0N0 161 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 TTI2Q6NXR4 508 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 RNF168Q8IYW5 571 aaPredicted RBP18.22■□□□□ 0.51
RER1-208ENST00000493207 C1orf127Q8N9H9 656 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 PLEKHO2Q8TD55 490 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 PARD3BQ8TEW8 1205 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 AUTS2Q8WXX7 1259 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 B3GALT6Q96L58 329 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 DUSP9Q99956 384 aaKnown RBP18.22■□□□□ 0.51
RER1-208ENST00000493207 GZF1Q9H116 711 aaPredicted RBP18.22■□□□□ 0.51
RER1-208ENST00000493207 NUB1Q9Y5A7 615 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 SCN1AP35498 2009 aa18.22■□□□□ 0.51
RER1-208ENST00000493207 PRRC2BQ5JSZ5 2229 aaKnown RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 ANO9A1A5B4 782 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 LRRIQ3A6PVS8 624 aaPredicted RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 I3L4J1 428 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms