RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 KIAA0319Q5VV43 1072 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 PDXDC1Q6P996 788 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 CRELD2Q6UXH1 353 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-207ENST00000488591 PPFIBP1Q86W92 1011 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 GPR65Q8IYL9 337 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 GPD1LQ8N335 351 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 BEST2Q8NFU1 509 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 GOLGA5Q8TBA6 731 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 TTPALQ9BTX7 342 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.35■□□□□ 0.21
CXCL12-207ENST00000488591 CHST7Q9NS84 486 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 NUB1Q9Y5A7 615 aa16.35■□□□□ 0.21
CXCL12-207ENST00000488591 PDCD11Q14690 1871 aaKnown RBP16.34■□□□□ 0.21
CXCL12-207ENST00000488591 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 GOLGA8JA6NMD2 632 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 LINC01565O15544 149 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 CLASP2O75122 1294 aaKnown RBP16.34■□□□□ 0.21
CXCL12-207ENST00000488591 RHOBTB3O94955 611 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 KLRC2P26717 231 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 ZBTB6Q15916 424 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 LEXMQ3ZCV2 418 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 JADE1Q6IE81 842 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 CEP57Q86XR8 500 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 NT5DC4Q86YG4 428 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 RIN2Q8WYP3 895 aaPredicted RBP16.34■□□□□ 0.21
CXCL12-207ENST00000488591 AGPAT3Q9NRZ7 376 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 RBAKQ9NYW8 714 aaPredicted RBP16.34■□□□□ 0.21
CXCL12-207ENST00000488591 HSPBP1Q9NZL4 362 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 TUBGCP4Q9UGJ1 667 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 C2CD2Q9Y426 696 aa16.34■□□□□ 0.21
CXCL12-207ENST00000488591 ZNF233A6NK53 670 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 H3BQ06 376 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-207ENST00000488591 TGFB1I1O43294 461 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 LILRB3O75022 631 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-207ENST00000488591 ADH1AP07327 375 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 CNPP09543 421 aaKnown RBP16.33■□□□□ 0.2
CXCL12-207ENST00000488591 LRPAP1P30533 357 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 UBE2HP62256 183 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 PNOCQ13519 176 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 TJAP1Q5JTD0 557 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 SPATA1Q5VX52 437 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 LLGL2Q6P1M3 1020 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-207ENST00000488591 BRSK2Q8IWQ3 736 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 CACTINQ8WUQ7 758 aaKnown RBP16.33■□□□□ 0.2
CXCL12-207ENST00000488591 CASP10Q92851 521 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 KLHL5Q96PQ7 755 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 FAM50BQ9Y247 325 aa16.33■□□□□ 0.2
CXCL12-207ENST00000488591 CLIC2O15247 247 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 REV3LO60673 3130 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 NFICP08651 508 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 PAX3P23760 479 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 MCM4P33991 863 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 LTBRP36941 435 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 SURF1Q15526 300 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 EYSQ5T1H1 3165 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 TMEM184AQ6ZMB5 413 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-207ENST00000488591 XXYLT1Q8NBI6 393 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 B3GALT6Q96L58 329 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 GTPBP4Q9BZE4 634 aaKnown RBP16.32■□□□□ 0.2
CXCL12-207ENST00000488591 RXFP1Q9HBX9 757 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 CD207Q9UJ71 328 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 BARX2Q9UMQ3 279 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-207ENST00000488591 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
CXCL12-207ENST00000488591 TEX28O15482 410 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 TBX10O75333 385 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 PRPF40AO75400 957 aaKnown RBP16.31■□□□□ 0.2
CXCL12-207ENST00000488591 FGFR3P22607 806 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 BRCC3P46736 316 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 CYP2J2P51589 502 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 TFAMQ00059 246 aaKnown RBP16.31■□□□□ 0.2
CXCL12-207ENST00000488591 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
CXCL12-207ENST00000488591 KCNC3Q14003 757 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 RTP2Q5QGT7 225 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 ELMSAN1Q6PJG2 1045 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 C12orf56Q8IXR9 622 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 C3orf58Q8NDZ4 430 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 PIK3R5Q8WYR1 880 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 DPP3Q9NY33 737 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 DPP7Q9UHL4 492 aa16.31■□□□□ 0.2
CXCL12-207ENST00000488591 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 I3L4J1 428 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 PDXKO00764 312 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 SYN3O14994 580 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 CALUO43852 315 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-207ENST00000488591 EXOC3O60645 756 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 GLP2RO95838 553 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 HOXB8P17481 243 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms