RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TFAMQ00059 246 aaKnown RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 UPP1Q16831 310 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 C11orf57Q6ZUT1 292 aaPredicted RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 FILIP1Q7Z7B0 1213 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 USP37Q86T82 979 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 KLHL23Q8NBE8 558 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 CACTINQ8WUQ7 758 aaKnown RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 ARNTL2Q8WYA1 636 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 BORCS6Q96GS4 357 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 COLEC11Q9BWP8 271 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 CERS4Q9HA82 394 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 MARCH5Q9NX47 278 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 PRG3Q9Y2Y8 225 aaPredicted RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 NT5C1B-RDH14C9J2C7 533 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 H3BNC9 293 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 TMEM189-UBE2V1I3L0A0 370 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 FGF18O76093 207 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 FGFR1OPO95684 399 aaKnown RBP21.55■■□□□ 1.04
COL6A2-208ENST00000485591 TMEM191BP0C7N4 346 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 KRT13P13646 458 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 CLCNKBP51801 687 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 VAMP7P51809 220 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 PLCB3Q01970 1234 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 BFSP1Q12934 665 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 TMEM173Q86WV6 379 aaPredicted RBP21.55■■□□□ 1.04
COL6A2-208ENST00000485591 IGSF21Q96ID5 467 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 ANKRD36BP1Q96IX9 119 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 SRRTQ9BXP5 876 aaKnown RBP21.55■■□□□ 1.04
COL6A2-208ENST00000485591 MTMR12Q9C0I1 747 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 DNAJC25Q9H1X3 360 aa21.55■■□□□ 1.04
COL6A2-208ENST00000485591 EPOPA6NHQ4 379 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 LRRIQ3A6PVS8 624 aaPredicted RBP21.54■■□□□ 1.04
COL6A2-208ENST00000485591 TULP1O00294 542 aaPredicted RBP21.54■■□□□ 1.04
COL6A2-208ENST00000485591 PODXLO00592 558 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 KIF4AO95239 1232 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 ITGB1P05556 798 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 TNNI1P19237 187 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 GUCY2FP51841 1108 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 DUOXA2Q1HG44 320 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 LMBRD2Q68DH5 695 aaPredicted RBP21.54■■□□□ 1.04
COL6A2-208ENST00000485591 DCLRE1AQ6PJP8 1040 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 OR5B17Q8NGF7 314 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 BCL7CQ8WUZ0 217 aaPredicted RBP21.54■■□□□ 1.04
COL6A2-208ENST00000485591 RABGGTAQ92696 567 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 TMEM169Q96HH4 297 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 POP1Q99575 1024 aaKnown RBP21.54■■□□□ 1.04
COL6A2-208ENST00000485591 DPP3Q9NY33 737 aa21.54■■□□□ 1.04
COL6A2-208ENST00000485591 SCN1AP35498 2009 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 ANO9A1A5B4 782 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 F8W810 466 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 GNA14O95837 355 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 TNNC2P02585 160 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 AP3M2P53677 418 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 MARSP56192 900 aaKnown RBP21.53■■□□□ 1.04
COL6A2-208ENST00000485591 DLG4P78352 724 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 UBE3AQ05086 875 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 GPM6BQ13491 265 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 TPD52L1Q16890 204 aaPredicted RBP21.53■■□□□ 1.04
COL6A2-208ENST00000485591 ANO6Q4KMQ2 910 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 FRMD5Q7Z6J6 570 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 TMEM130Q8N3G9 435 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 C1orf127Q8N9H9 656 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 ENOX1Q8TC92 643 aaKnown RBP21.53■■□□□ 1.04
COL6A2-208ENST00000485591 METTL14Q9HCE5 456 aaKnown RBP21.53■■□□□ 1.04
COL6A2-208ENST00000485591 ARMCX3Q9UH62 379 aaPredicted RBP21.53■■□□□ 1.04
COL6A2-208ENST00000485591 ADAM28Q9UKQ2 775 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 ITGA11Q9UKX5 1188 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 LZTS1Q9Y250 596 aa21.53■■□□□ 1.04
COL6A2-208ENST00000485591 IKBKBO14920 756 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 B3GAT3O94766 335 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 KRT17Q04695 432 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 CCDC40Q4G0X9 1142 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 C1orf220Q5T0J3 134 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 C9orf57Q5W0N0 161 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 C3orf58Q8NDZ4 430 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 GDPD5Q8WTR4 605 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 ZNF516Q92618 1163 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 FAM84AQ96KN4 292 aa21.52■■□□□ 1.04
COL6A2-208ENST00000485591 NAT10Q9H0A0 1025 aaKnown RBP21.52■■□□□ 1.04
COL6A2-208ENST00000485591 VWA8A3KMH1 1905 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 PIRO00625 290 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 EFEMP2O95967 443 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 ITGB3P05106 788 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 TRIM49P0CI25 452 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 TRIM49CP0CI26 452 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 GRIN2CQ14957 1233 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 CD300LGQ6UXG3 332 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 TRAPPC11Q7Z392 1133 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 DDX53Q86TM3 631 aaKnown RBP21.51■■□□□ 1.03
COL6A2-208ENST00000485591 RNF168Q8IYW5 571 aaPredicted RBP21.51■■□□□ 1.03
COL6A2-208ENST00000485591 CXorf38Q8TB03 319 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 SPPL3Q8TCT6 385 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 BPIFA3Q9BQP9 254 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 LMAN2LQ9H0V9 348 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 THAP9Q9H5L6 903 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 ALG13Q9NP73 1137 aaKnown RBP21.51■■□□□ 1.03
COL6A2-208ENST00000485591 STK39Q9UEW8 545 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 CHD9Q3L8U1 2897 aa21.51■■□□□ 1.03
COL6A2-208ENST00000485591 TSC2P49815 1807 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 PPEF2O14830 753 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms