RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SLC39A11Q8N1S5 342 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 LINC01465Q8N7H1 131 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 KREMEN2Q8NCW0 462 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 RDM1Q8NG50 284 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 ATOH1Q92858 354 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 ZNF668Q96K58 619 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 RIT2Q99578 217 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 TRIM56Q9BRZ2 755 aaKnown RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 TEKT3Q9BXF9 490 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 C22orf23Q9BZE7 217 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 INO80BQ9C086 356 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 ADAM7Q9H2U9 754 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 CHST12Q9NRB3 414 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 SORCS3Q9UPU3 1222 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 TECTAO75443 2155 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 NT5C1B-RDH14C9J2C7 533 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 ZNF862O60290 1169 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 CLASP2O75122 1294 aaKnown RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 ZC3H11AO75152 810 aaKnown RBP eCLIP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 CDC45O75419 566 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 FBXO24O75426 580 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 GHRHP01286 108 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 BMP4P12644 408 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 ATP2B1P20020 1258 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 DNAJA1P31689 397 aaKnown RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 RAB27AP51159 221 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 USP11P51784 963 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 POLGP54098 1239 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 BCAR1P56945 870 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 NLRP5P59047 1200 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 ATP11AP98196 1134 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 ARID5AQ03989 594 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 RNASELQ05823 741 aaKnown RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 MTERF2Q49AM1 385 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 XKR3Q5GH77 459 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 CLLU1OSQ5K130 101 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 ATAT1Q5SQI0 421 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 LRCH2Q5VUJ6 765 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 TWF2Q6IBS0 349 aaKnown RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 BLOC1S2Q6QNY1 142 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 GLB1LQ6UWU2 654 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 Q6ZUG5 572 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 VPS52Q8N1B4 723 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 TDRD5Q8NAT2 981 aaKnown RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 BRF1Q92994 677 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 LENG9Q96B70 501 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 CCDC136Q96JN2 1154 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 JPH2Q9BR39 696 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 SLC26A6Q9BXS9 759 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 RNF26Q9BY78 433 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 MFSD1Q9H3U5 465 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 POMKQ9H5K3 350 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 FAM86C1Q9NVL1 165 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 STK39Q9UEW8 545 aa6.58□□□□□ -1.36
CSDE1-207ENST00000483407 DBR1Q9UK59 544 aaKnown RBP6.58□□□□□ -1.36
CSDE1-207ENST00000483407 A0A087WZ62 844 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ADARB2-AS1A8MUL3 147 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 C2CD4DB7Z1M9 353 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 H0Y858 1186 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ENC1O14682 589 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 MSH4O15457 936 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ARAFP10398 606 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 CTSAP10619 480 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 MX2P20592 715 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 FGFR4P22455 802 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 PSMA5P28066 241 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 PCBP4P57723 403 aaKnown RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 TARBP2Q15633 366 aaKnown RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 UGCGQ16739 394 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 NOMO2Q5JPE7 1267 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 RARS2Q5T160 578 aaKnown RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 KIAA1841Q6NSI8 718 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 MIER3Q7Z3K6 550 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 DDX53Q86TM3 631 aaKnown RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 CABP7Q86V35 215 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ZNF410Q86VK4 478 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ZDHHC14Q8IZN3 488 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ASAP3Q8TDY4 903 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 SLC5A5Q92911 643 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 PHKBQ93100 1093 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ACSF2Q96CM8 615 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 PGBD4Q96DM1 585 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 IGSF21Q96ID5 467 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 RHOVQ96L33 236 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 JAKMIP1Q96N16 626 aaKnown RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 MDFIQ99750 246 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 FDXACB1Q9BRP7 624 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 SPON2Q9BUD6 331 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 EMILIN2Q9BXX0 1053 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ZBP1Q9H171 429 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 UNC45AQ9H3U1 944 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 SH3GLB2Q9NR46 395 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 FAM105AQ9NUU6 356 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 VPS54Q9P1Q0 977 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms