RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SPATA1Q5VX52 437 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
CCDC78-212ENST00000482152 TAS1R1Q7RTX1 841 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 CACTINQ8WUQ7 758 aaKnown RBP17.73■□□□□ 0.43
CCDC78-212ENST00000482152 C18orf25Q96B23 403 aaPredicted RBP17.73■□□□□ 0.43
CCDC78-212ENST00000482152 FAM212AQ96EL1 285 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 FBXL18Q96ME1 805 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 CBWD1Q9BRT8 395 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 TTPALQ9BTX7 342 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 IKZF4Q9H2S9 585 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 AGPAT3Q9NRZ7 376 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
CCDC78-212ENST00000482152 CLASP2O75122 1294 aaKnown RBP17.72■□□□□ 0.43
CCDC78-212ENST00000482152 PRR29P0C7W0 189 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 HOXB8P17481 243 aaPredicted RBP17.72■□□□□ 0.43
CCDC78-212ENST00000482152 CA8P35219 290 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 NDUFV1P49821 464 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 FAM171A1Q5VUB5 890 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 JADE1Q6IE81 842 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 BRSK2Q8IWQ3 736 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 NELFCDQ8IXH7 590 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 XXYLT1Q8NBI6 393 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 KIAA0895Q8NCT3 520 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 SPATA20Q8TB22 786 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 CASP10Q92851 521 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 PCIF1Q9H4Z3 704 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 RBAKQ9NYW8 714 aaPredicted RBP17.72■□□□□ 0.43
CCDC78-212ENST00000482152 HSPBP1Q9NZL4 362 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 NUB1Q9Y5A7 615 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 PCDHGC5Q9Y5F6 944 aa17.72■□□□□ 0.43
CCDC78-212ENST00000482152 ARHGEF37A1IGU5 675 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 F8W810 466 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 PDXKO00764 312 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 ADH1AP07327 375 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 KCNA5P22460 613 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 FGFR3P22607 806 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 KLRC2P26717 231 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 GTF2F1P35269 517 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCDC78-212ENST00000482152 LTBRP36941 435 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 TJAP1Q5JTD0 557 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 ELMSAN1Q6PJG2 1045 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 EP400NLQ6ZTU2 488 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 SLC9A9Q8IVB4 645 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 GUF1Q8N442 669 aaKnown RBP17.71■□□□□ 0.43
CCDC78-212ENST00000482152 PIK3R5Q8WYR1 880 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 SAAL1Q96ER3 474 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 KLHL5Q96PQ7 755 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 GOLGA2P5Q9HBQ8 144 aa17.71■□□□□ 0.43
CCDC78-212ENST00000482152 SYN3O14994 580 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 CALUO43852 315 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-212ENST00000482152 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-212ENST00000482152 PRPF40AO75400 957 aaKnown RBP17.7■□□□□ 0.42
CCDC78-212ENST00000482152 CNPP09543 421 aaKnown RBP17.7■□□□□ 0.42
CCDC78-212ENST00000482152 COBLL1Q53SF7 1204 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 CD300LGQ6UXG3 332 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 ANKS3Q6ZW76 656 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 HASPINQ8TF76 798 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 HDAC7Q8WUI4 952 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 AUTS2Q8WXX7 1259 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 RIN2Q8WYP3 895 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-212ENST00000482152 SMARCE1Q969G3 411 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 SUSD3Q96L08 255 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 KCTD10Q9H3F6 313 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 DZANK1Q9NVP4 752 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 CACNG4Q9UBN1 327 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 TRAF3IP3Q9Y228 551 aa17.7■□□□□ 0.42
CCDC78-212ENST00000482152 EYSQ5T1H1 3165 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 CITO14578 2027 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 C2CD2LO14523 706 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 SPAG1Q07617 926 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 PNOCQ13519 176 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 NFIL3Q16649 462 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 CEP57Q86XR8 500 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 APPL2Q8NEU8 664 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 LNX1Q8TBB1 728 aaPredicted RBP17.69■□□□□ 0.42
CCDC78-212ENST00000482152 SLC22A17Q8WUG5 538 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 GBP4Q96PP9 640 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 OXCT2Q9BYC2 517 aaPredicted RBP17.69■□□□□ 0.42
CCDC78-212ENST00000482152 DMAC2Q9NW81 257 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 DPP3Q9NY33 737 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 CD207Q9UJ71 328 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 PCDHA5Q9Y5H7 936 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 HCFC2Q9Y5Z7 792 aa17.69■□□□□ 0.42
CCDC78-212ENST00000482152 ANO9A1A5B4 782 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 GOLGA8IPA6NC78 632 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 GOLGA8JA6NMD2 632 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 H7C4K7 107 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 PIRO00625 290 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 CLIC2O15247 247 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 TEX28O15482 410 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 LINC01565O15544 149 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 GLP2RO95838 553 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 NFICP08651 508 aa17.68■□□□□ 0.42
CCDC78-212ENST00000482152 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
CCDC78-212ENST00000482152 MCM4P33991 863 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms