RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
TRA2B-212ENST00000480461 KYAT1Q16773 422 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 TIGD5Q53EQ6 642 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 JADE1Q6IE81 842 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 CD300LGQ6UXG3 332 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 C11orf57Q6ZUT1 292 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-212ENST00000480461 TMEM173Q86WV6 379 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-212ENST00000480461 IRF2BP1Q8IU81 584 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 BRSK2Q8IWQ3 736 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 EFCAB13Q8IY85 973 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 ABI1Q8IZP0 508 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 BCL7CQ8WUZ0 217 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-212ENST00000480461 GOLGA2P5Q9HBQ8 144 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 RBAKQ9NYW8 714 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-212ENST00000480461 KANSL3Q9P2N6 904 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 PRKAG3Q9UGI9 489 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 C5orf42Q9H799 3197 aa13.28□□□□□ -0.28
TRA2B-212ENST00000480461 FNDC1Q4ZHG4 1894 aaPredicted RBP13.27□□□□□ -0.28
TRA2B-212ENST00000480461 CFAP54Q96N23 3096 aa13.27□□□□□ -0.28
TRA2B-212ENST00000480461 SYCE3A1L190 88 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 NT5C1B-RDH14C9J2C7 533 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 KIAA0391O15091 583 aaKnown RBP13.27□□□□□ -0.29
TRA2B-212ENST00000480461 THP07101 528 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 GALTP07902 379 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 BMPR1AP36894 532 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 SLC11A1P49279 550 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 BCAR1P56945 870 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 LRRC63Q05C16 580 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 TYRO3Q06418 890 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 CYP24A1Q07973 514 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 PAK1Q13153 545 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 ZSCAN23Q3MJ62 389 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 CEP135Q66GS9 1140 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 SASS6Q6UVJ0 657 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 PRSS33Q8NF86 280 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 OR5B17Q8NGF7 314 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 CXorf38Q8TB03 319 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 PABPC5Q96DU9 382 aaKnown RBP13.27□□□□□ -0.29
TRA2B-212ENST00000480461 KIAA1586Q9HCI6 787 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 TOPORSQ9NS56 1045 aaPredicted RBP13.27□□□□□ -0.29
TRA2B-212ENST00000480461 TUBGCP4Q9UGJ1 667 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 RWDD2AQ9UIY3 292 aa13.27□□□□□ -0.29
TRA2B-212ENST00000480461 NRP1O14786 923 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 ITGB1P05556 798 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 IRS1P35568 1242 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 PPP1R2P41236 205 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 CLDN10P78369 228 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 FKBP3Q00688 224 aaKnown RBP13.26□□□□□ -0.29
TRA2B-212ENST00000480461 RNASELQ05823 741 aaKnown RBP13.26□□□□□ -0.29
TRA2B-212ENST00000480461 GRIK3Q13003 919 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 STIM1Q13586 685 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 PSMD6Q15008 389 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 PTPROQ16827 1216 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 TCEAL5Q5H9L2 206 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 LMBRD2Q68DH5 695 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-212ENST00000480461 FOXR2Q6PJQ5 311 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 KCNT2Q6UVM3 1135 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 LRRC43Q8N309 656 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 COLGALT1Q8NBJ5 622 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 URGCPQ8TCY9 931 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 PARD3BQ8TEW8 1205 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 CCDC127Q96BQ5 260 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 SRRTQ9BXP5 876 aaKnown RBP13.26□□□□□ -0.29
TRA2B-212ENST00000480461 ASB7Q9H672 318 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 FAM50BQ9Y247 325 aa13.26□□□□□ -0.29
TRA2B-212ENST00000480461 CASTOR2A6NHX0 329 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-212ENST00000480461 PPEF2O14830 753 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 CETN3O15182 167 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 ZC3H11AO75152 810 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRA2B-212ENST00000480461 IL18RAPO95256 599 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 EFEMP2O95967 443 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 ALDH2P05091 517 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 DNAJB1P25685 340 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 RPL13P26373 211 aaKnown RBP13.25□□□□□ -0.29
TRA2B-212ENST00000480461 ERCC5P28715 1186 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-212ENST00000480461 CLCNKBP51801 687 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 PPP2R3AQ06190 1150 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 TUSC3Q13454 348 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 UPP1Q16831 310 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 SPATA1Q5VX52 437 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 FILIP1Q7Z7B0 1213 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 CD302Q8IX05 232 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 KLHL23Q8NBE8 558 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 C3orf58Q8NDZ4 430 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 SYAP1Q96A49 352 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-212ENST00000480461 RPS6KC1Q96S38 1066 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 VN1R3Q9BXE9 311 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 MRPL9Q9BYD2 267 aaKnown RBP13.25□□□□□ -0.29
TRA2B-212ENST00000480461 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 MARCH5Q9NX47 278 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 MUTYHQ9UIF7 546 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 ATG2AQ2TAZ0 1938 aa13.25□□□□□ -0.29
TRA2B-212ENST00000480461 TECTAO75443 2155 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 LRRIQ3A6PVS8 624 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-212ENST00000480461 C5orf67F2Z3F1 127 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms