RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CBWD5Q5RIA9 395 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 TDRD10Q5VZ19 366 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 LMBRD2Q68DH5 695 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 TRAPPC11Q7Z392 1133 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 C1orf127Q8N9H9 656 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 UROC1Q96N76 676 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 MIOSQ9NXC5 875 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 SCN1AP35498 2009 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 ANO9A1A5B4 782 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 CBFA2T2O43439 604 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 TPM3P06753 285 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 SOX4Q06945 474 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 CETN1Q12798 172 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 GSE1Q14687 1217 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 FKBP15Q5T1M5 1219 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 CREBRFQ8IUR6 639 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 RNPC3Q96LT9 517 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 NAP1L5Q96NT1 182 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 VPS16Q9H269 839 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 GRPEL1Q9HAV7 217 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 DPP3Q9NY33 737 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 SIX4Q9UIU6 781 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 INPP5FQ9Y2H2 1132 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 TSC2P49815 1807 aa13.54□□□□□ -0.24
TRAPPC12-218ENST00000479897 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 TBKBP1A7MCY6 615 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 AP5Z1O43299 807 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 ZC3H11AO75152 810 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 UPP2O95045 317 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 VNN1O95497 513 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 POMCP01189 267 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 IBSPP21815 317 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 PAX3P23760 479 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 RPL9P32969 192 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 PBX1P40424 430 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 GATMP50440 423 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 UBASH3AP57075 661 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 BIRC3Q13489 604 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 NR1I3Q14994 352 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 COLGALT2Q8IYK4 626 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 TAF4BQ92750 862 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 C18orf25Q96B23 403 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 FAM84AQ96KN4 292 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 TMEM175Q9BSA9 504 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
TRAPPC12-218ENST00000479897 PIRO00625 290 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 B4GALT3O60512 393 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 DDHD2O94830 711 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 HLA-DRAP01903 254 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 ITGB3P05106 788 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 ATICP31939 592 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 PNPLA4P41247 253 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 PIK3CAP42336 1068 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 MRE11P49959 708 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 RBP5P82980 135 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 NCOA4Q13772 614 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 SHHQ15465 462 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 UPP1Q16831 310 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 TAS1R2Q8TE23 839 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 MRFAP1L1Q96HT8 127 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 FAXDC2Q96IV6 333 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 ZNF560Q96MR9 790 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 YME1L1Q96TA2 773 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 RAD9AQ99638 391 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 XYLT2Q9H1B5 865 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 PRO3102Q9H379 93 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 CWH43Q9H720 699 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 GOLGA2P5Q9HBQ8 144 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 RAB20Q9NX57 234 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 GCNT4Q9P109 453 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 SIK3Q9Y2K2 1263 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 DAAM1Q9Y4D1 1078 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 INSL6Q9Y581 213 aa13.52□□□□□ -0.25
TRAPPC12-218ENST00000479897 ITIH6Q6UXX5 1313 aa13.51□□□□□ -0.25
TRAPPC12-218ENST00000479897 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-218ENST00000479897 PODXLO00592 558 aa13.51□□□□□ -0.25
TRAPPC12-218ENST00000479897 TEX33O43247 280 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms