RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SLC23A1Q9UHI7 598 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 STXBP5LQ9Y2K9 1186 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 PNPLA7Q6ZV29 1317 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 TCRBV7S2A1N4TA0A589 114 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 KIF3BO15066 747 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 KIAA0391O15091 583 aaKnown RBP6.31□□□□□ -1.4
PTCD3-211ENST00000476215 UBXN7O94888 489 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 ARIH2O95376 493 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 SNAPC2Q13487 334 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 ATXN7L2Q5T6C5 722 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-211ENST00000476215 CCDC181Q5TID7 509 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 FNDC7Q5VTL7 733 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 C1QL3Q5VWW1 255 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 SLC4A10Q6U841 1118 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 SEM1Q6ZVN7 128 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 GPRIN1Q7Z2K8 1008 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 UBE3BQ7Z3V4 1068 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 HEATR3Q7Z4Q2 680 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 SH2D3CQ8N5H7 860 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 OR52N2Q8NGI0 321 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 PGBD4Q96DM1 585 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 LMBRD1Q9NUN5 540 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 POGKQ9P215 609 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 ABCF2Q9UG63 623 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 CLCA2Q9UQC9 943 aa6.31□□□□□ -1.4
PTCD3-211ENST00000476215 FRMPD2Q68DX3 1309 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-211ENST00000476215 NPIPB8E9PQR5 432 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 H3BUI4 141 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 GRM6O15303 877 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 B3GALT2O43825 422 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 CD1AP06126 327 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 HTR1BP28222 390 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 IL12RB1P42701 662 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 SCNN1GP51170 649 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 GRM3Q14832 879 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 METTL24Q5JXM2 366 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 Q6ZRM9 215 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 OVCH2Q7RTZ1 564 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 DAAM2Q86T65 1068 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 KLHDC4Q8TBB5 520 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 GPR87Q9BY21 358 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 GEMIN8Q9NWZ8 242 aaKnown RBP6.3□□□□□ -1.4
PTCD3-211ENST00000476215 GABBR1Q9UBS5 961 aa6.3□□□□□ -1.4
PTCD3-211ENST00000476215 KLRG2A4D1S0 409 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-211ENST00000476215 TUSC2O75896 110 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 POMCP01189 267 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 SBK3P0C264 359 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 DGCR2P98153 550 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 CRHR2Q13324 411 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 GBX1Q14549 363 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 VPS72Q15906 364 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 CSRP2Q16527 193 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 LSM12Q3MHD2 195 aaKnown RBP6.29□□□□□ -1.4
PTCD3-211ENST00000476215 FLYWCH1Q4VC44 716 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 PABPC1LQ4VXU2 614 aaKnown RBP6.29□□□□□ -1.4
PTCD3-211ENST00000476215 DCAF17Q5H9S7 520 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-211ENST00000476215 DACT2Q5SW24 774 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 NOL8Q76FK4 1167 aaKnown RBP6.29□□□□□ -1.4
PTCD3-211ENST00000476215 DGKHQ86XP1 1220 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 OR10H5Q8NGA6 315 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 PHACTR3Q96KR7 559 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 LRFN3Q9BTN0 628 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 NDC1Q9BTX1 674 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 FAM204AQ9H8W3 233 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 ARMT1Q9H993 441 aa6.29□□□□□ -1.4
PTCD3-211ENST00000476215 FEZ2Q9UHY8 353 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-211ENST00000476215 GRXCR1A8MXD5 290 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 F2RL2O00254 374 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 ZNF202O95125 648 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 MTHFD1P11586 935 aaKnown RBP6.28□□□□□ -1.4
PTCD3-211ENST00000476215 ALAS1P13196 640 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 TYRP14679 529 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 MGAT1P26572 445 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 MAN2A2P49641 1150 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 KLF10Q13118 480 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 TUBA3CQ13748 450 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 CNGB1Q14028 1251 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-211ENST00000476215 TOB2Q14106 344 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-211ENST00000476215 UBXN2BQ14CS0 331 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 LLGL1Q15334 1064 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 PPP4R4Q6NUP7 873 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 TUBA3EQ6PEY2 450 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 DRICH1Q6PGQ1 229 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-211ENST00000476215 TIFAQ96CG3 184 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 MTFMTQ96DP5 389 aaKnown RBP6.28□□□□□ -1.4
PTCD3-211ENST00000476215 SLC35A4Q96G79 324 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 FAM167AQ96KS9 214 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 PLEKHG4BQ96PX9 1271 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 MNTQ99583 582 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 PACSIN1Q9BY11 444 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 B3GNT5Q9BYG0 378 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 ZNF341Q9BYN7 854 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 WDCPQ9H6R7 721 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 PNPOQ9NVS9 261 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 FBXO34Q9NWN3 711 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 PARPBPQ9NWS1 579 aa6.28□□□□□ -1.4
PTCD3-211ENST00000476215 HS3ST3A1Q9Y663 406 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms