RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	SRCIN1	Q9C0H9	1055 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	TNKS2	Q9H2K2	1166 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	EPB41L1	Q9H4G0	881 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	XKR8	Q9H6D3	395 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	LIN7B	Q9HAP6	207 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	TRPV4	Q9HBA0	871 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	INTS10	Q9NVR2	710 aa	Known RBP	4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	PTTG2	Q9NZH5	202 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	HACD3	Q9P035	362 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	TBC1D14	Q9P2M4	693 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	GIMAP2	Q9UG22	337 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	ZRANB1	Q9UGI0	708 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	KCNN3	Q9UGI6	736 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	CD300A	Q9UGN4	299 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	ADGRE2	Q9UHX3	823 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	SLC8A2	Q9UPR5	921 aa		4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	HBS1L	Q9Y450	684 aa	Known RBP	4.08	□□□□□ -1.76
LSM2-211	ENST00000475835	MYH15	Q9Y2K3	1946 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PREX1	Q8TCU6	1659 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	COL3A1	P02461	1466 aa	Predicted RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835		A0A0A6YYJ9	748 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	CTAGE9	A4FU28	777 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	DPPA5	A6NC42	116 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	SYNDIG1L	A6NDD5	238 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	TSPY2	A6NKD2	308 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	C16orf96	A6NNT2	1141 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	POM121C	A8CG34	1229 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	SLCO1B7	G3V0H7	640 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	TK2	O00142	265 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	MASP2	O00187	686 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	NDUFS8	O00217	210 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	FBP2	O00757	339 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	IKBKB	O14920	756 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	RGS13	O14921	159 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	FANCG	O15287	622 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	RAD51B	O15315	384 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	HNRNPR	O43390	633 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	JRK	O75564	520 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PDE5A	O76074	875 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PRPF6	O94906	941 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ANP32D	O95626	131 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ASMTL	O95671	621 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	IL33	O95760	270 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	F2	P00734	622 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PLG	P00747	810 aa	Predicted RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ASS1	P00966	412 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ALB	P02768	609 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	HEXB	P07686	556 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	CYP3A4	P08684	503 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	SNRPA	P09012	282 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	TSPY3	P0CV98	308 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	TSPY8	P0CW00	308 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PDHB	P11177	359 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PYGM	P11217	842 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ANPEP	P15144	967 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ATP6V1C1	P21283	382 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	SP100	P23497	879 aa	Predicted RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	DNAJB1	P25685	340 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	GSTT1	P30711	240 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	MAPK9	P45984	424 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PCYT1A	P49585	367 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	MTHFS	P49914	203 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	BCAM	P50895	628 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	IRAK1	P51617	712 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ADAR	P55265	1226 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	TSPAN5	P62079	268 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	TSPY1	Q01534	308 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	IL1RL1	Q01638	556 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	CHRNE	Q04844	493 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ENPEP	Q07075	957 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	VAC14	Q08AM6	782 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	NR5A1	Q13285	461 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	IFIT5	Q13325	482 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PICALM	Q13492	652 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	DCTN2	Q13561	401 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	SNW1	Q13573	536 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ITGA9	Q13797	1035 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PTK2B	Q14289	1009 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	LRRC41	Q15345	812 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	AMHR2	Q16671	573 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	GSTA3	Q16772	222 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	AARD	Q4LEZ3	155 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	TJAP1	Q5JTD0	557 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	MAP3K21	Q5TCX8	1036 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PDPK2P	Q6A1A2	396 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PM20D1	Q6GTS8	502 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	DTHD1	Q6ZMT9	781 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	KIF6	Q6ZMV9	814 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PIK3AP1	Q6ZUJ8	805 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	FASTKD5	Q7L8L6	764 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PATL1	Q86TB9	770 aa	Known RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	ADAMTSL2	Q86TH1	951 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	WDR49	Q8IV35	697 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	HID1	Q8IV36	788 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	COLGALT2	Q8IYK4	626 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	PM20D2	Q8IYS1	436 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	KIRREL3	Q8IZU9	778 aa		4.07	□□□□□ -1.76
LSM2-211	ENST00000475835	LIX1	Q8N485	282 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms