RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 CXCL16Q9H2A7 254 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 NGRNQ9NPE2 291 aaKnown RBP16.41■□□□□ 0.22
SNX13-207ENST00000475800 C11orf16Q9NQ32 467 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
SNX13-207ENST00000475800 ADAM28Q9UKQ2 775 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 TRAF3IP3Q9Y228 551 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 CLIC2O15247 247 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 MEFVO15553 781 aaPredicted RBP16.4■□□□□ 0.22
SNX13-207ENST00000475800 TADA2AO75478 443 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 MBD3O95983 291 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 RPL13P26373 211 aaKnown RBP16.4■□□□□ 0.22
SNX13-207ENST00000475800 CYP2J2P51589 502 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 DLX2Q07687 328 aaPredicted RBP16.4■□□□□ 0.22
SNX13-207ENST00000475800 TMEM132DQ14C87 1099 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 NFIL3Q16649 462 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
SNX13-207ENST00000475800 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
SNX13-207ENST00000475800 ERCC4Q92889 916 aaPredicted RBP16.4■□□□□ 0.22
SNX13-207ENST00000475800 PABPC5Q96DU9 382 aaKnown RBP16.4■□□□□ 0.22
SNX13-207ENST00000475800 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 ENTPD7Q9NQZ7 604 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 MARCH5Q9NX47 278 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 KIAA1468Q9P260 1216 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 SSX2IPQ9Y2D8 614 aa16.4■□□□□ 0.22
SNX13-207ENST00000475800 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.225e-6■■■■■ 69.1
SNX13-207ENST00000475800 GOLGA8IPA6NC78 632 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 GOLGA8JA6NMD2 632 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 FSCN2O14926 492 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 LINC01565O15544 149 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 TRAPPC3O43617 180 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 EXOC3O60645 756 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 SOD2P04179 222 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 PAX3P23760 479 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 DNAJB1P25685 340 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 LRPAP1P30533 357 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 PLA2G5P39877 138 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 HYAL1Q12794 435 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 CAMK1Q14012 370 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
SNX13-207ENST00000475800 SNRNP35Q16560 246 aaKnown RBP16.39■□□□□ 0.21
SNX13-207ENST00000475800 UPP1Q16831 310 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 EDRF1Q3B7T1 1238 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 SPATA1Q5VX52 437 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 JADE1Q6IE81 842 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 FUT10Q6P4F1 479 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 TMC7Q7Z402 723 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 GPR65Q8IYL9 337 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 VPS52Q8N1B4 723 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 CACTINQ8WUQ7 758 aaKnown RBP16.39■□□□□ 0.21
SNX13-207ENST00000475800 HERC2P3Q9BVR0 1158 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 HCN4Q9Y3Q4 1203 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 C5orf42Q9H799 3197 aa16.39■□□□□ 0.21
SNX13-207ENST00000475800 PODXLO00592 558 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 PSMA7O14818 248 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 NCK2O43639 380 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 B3GAT3O94766 335 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 NR3C1P04150 777 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 CTSAP10619 480 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 PRCPP42785 496 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 CLCNKBP51801 687 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 SOX4Q06945 474 aaPredicted RBP16.38■□□□□ 0.21
SNX13-207ENST00000475800 MORC3Q14149 939 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 CAMK4Q16566 473 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 BCL7CQ8WUZ0 217 aaPredicted RBP16.38■□□□□ 0.21
SNX13-207ENST00000475800 C18orf25Q96B23 403 aaPredicted RBP16.38■□□□□ 0.21
SNX13-207ENST00000475800 TSG101Q99816 390 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 TCF25Q9BQ70 676 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 PAAF1Q9BRP4 392 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 ZBP1Q9H171 429 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 FRMD4BQ9Y2L6 1034 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 IRAK3Q9Y616 596 aa16.38■□□□□ 0.21
SNX13-207ENST00000475800 SCN1AP35498 2009 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 PI4K2BG5E9Z4 385 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 MAPK13O15264 365 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 KIF4AO95239 1232 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 EFEMP2O95967 443 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 URODP06132 367 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 NFICP08651 508 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 PTMSP20962 102 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 LTBRP36941 435 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 ERVFC1P60507 584 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 SPAG1Q07617 926 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 USP41Q3LFD5 358 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 ZCWPW2Q504Y3 356 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 CENPPQ6IPU0 288 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 USP37Q86T82 979 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 RBM23Q86U06 439 aaKnown RBP16.37■□□□□ 0.21
SNX13-207ENST00000475800 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
SNX13-207ENST00000475800 SMYD4Q8IYR2 804 aaPredicted RBP16.37■□□□□ 0.21
SNX13-207ENST00000475800 RNF168Q8IYW5 571 aaPredicted RBP16.37■□□□□ 0.21
SNX13-207ENST00000475800 ADSSL1Q8N142 457 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms