RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PPM1AP35813 382 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 KCNJ5P48544 419 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 PIK3CGP48736 1102 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 MRE11P49959 708 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 MLLT6P55198 1093 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-212ENST00000473961 SNAPC2Q13487 334 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 MTM1Q13496 603 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 PCOLCEQ15113 449 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF385BQ569K4 471 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 DACT2Q5SW24 774 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF783Q6ZMS7 281 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 Q6ZUG5 572 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 TMEM151BQ8IW70 566 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 MSL3Q8N5Y2 521 aaKnown RBP5.12□□□□□ -1.59
BRCA1-212ENST00000473961 ZCCHC14Q8WYQ9 949 aaKnown RBP5.12□□□□□ -1.59
BRCA1-212ENST00000473961 SIGLEC10Q96LC7 697 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 CRB3Q9BUF7 120 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 KATNBL1Q9H079 304 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 C11orf54Q9H0W9 315 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-212ENST00000473961 SLC6A15Q9H2J7 730 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 ATP6V0A4Q9HBG4 840 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 GPRC5BQ9NZH0 403 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 ANAPC4Q9UJX5 808 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 CTDP1Q9Y5B0 961 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-212ENST00000473961 MYO1FO00160 1098 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 APOL1O14791 398 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 TBC1D4O60343 1298 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 NBNO60934 754 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 TOX4O94842 621 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 CD1AP06126 327 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 PRDX5P30044 214 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 GRK6P43250 576 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 LIMS1P48059 325 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 MAPK10P53779 464 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF543Q08ER8 600 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 RAB32Q13637 225 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 BLMHQ13867 455 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 TRIM14Q14142 442 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 SSPNQ14714 243 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 STARD3Q14849 445 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 RTP5Q14D33 572 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF827Q17R98 1081 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 PABPC1LQ4VXU2 614 aaKnown RBP5.11□□□□□ -1.59
BRCA1-212ENST00000473961 EMC10Q5UCC4 262 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 AGBL4Q5VU57 503 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 USP30Q70CQ3 517 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 BEND5Q7L4P6 421 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF572Q7Z3I7 529 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-212ENST00000473961 SYTL1Q8IYJ3 562 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 TRMT2AQ8IZ69 625 aaKnown RBP5.11□□□□□ -1.59
BRCA1-212ENST00000473961 KLHL36Q8N4N3 616 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 NLGN4YQ8NFZ3 816 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-212ENST00000473961 OR5M3Q8NGP4 307 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 RAB24Q969Q5 203 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 AJUBAQ96IF1 538 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 NT5C1BQ96P26 610 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 NOX5Q96PH1 765 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 DMRTA2Q96SC8 542 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 BRIP1Q9BX63 1249 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 PACSIN1Q9BY11 444 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 MRPL46Q9H2W6 279 aaKnown RBP5.11□□□□□ -1.59
BRCA1-212ENST00000473961 GCM1Q9NP62 436 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 RLIMQ9NVW2 624 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 CFAP97Q9P2B7 532 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 GTF2A1LQ9UNN4 478 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 PCDHA1Q9Y5I3 950 aa5.11□□□□□ -1.59
BRCA1-212ENST00000473961 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 RFXAPO00287 272 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 THAP12O43422 761 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 FGF18O76093 207 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 AMY1AP04745 511 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 THP07101 528 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 RAP2AP10114 183 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 ALAS1P13196 640 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 NPR1P16066 1061 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 ABCB4P21439 1286 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 FLT3LGP49771 235 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 EPHB3P54753 998 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 RRADP55042 308 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 NPEPPSP55786 919 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 SUMO3P55854 103 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-212ENST00000473961 BPIFB4P59827 614 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 ZXDAP98168 799 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 ATP8B2P98198 1209 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 CAP1Q01518 475 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 FMO1Q01740 532 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 PRR31Q5SQ13 230 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 RALYLQ86SE5 291 aaKnown RBP5.1□□□□□ -1.59
BRCA1-212ENST00000473961 PLXDC1Q8IUK5 500 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 SDR16C5Q8N3Y7 309 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF527Q8NB42 609 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 FANCBQ8NB91 859 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 DDX17Q92841 729 aaKnown RBP5.1□□□□□ -1.59
BRCA1-212ENST00000473961 TNPO1Q92973 898 aaKnown RBP5.1□□□□□ -1.59
BRCA1-212ENST00000473961 NMD3Q96D46 503 aaKnown RBP5.1□□□□□ -1.59
BRCA1-212ENST00000473961 IQCDQ96DY2 449 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 TMEM41AQ96HV5 264 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 SYT3Q9BQG1 590 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 SIK2Q9H0K1 926 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 LDAHQ9H6V9 325 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms