RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 OGTO15294 1046 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 OFD1O75665 1012 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 MBD3O95983 291 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 ADSSP30520 456 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 TNFSF9P41273 254 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 FXR1P51114 621 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMC4-214ENST00000472991 SCNN1GP51170 649 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 AFF1P51825 1210 aaKnown RBP9.91□□□□□ -0.82
SMC4-214ENST00000472991 TAP1Q03518 808 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 NOMO2Q5JPE7 1267 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 ZBTB41Q5SVQ8 909 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 ISM2Q6H9L7 571 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 SLFN12LQ6IEE8 588 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 ARMCX5Q6P1M9 558 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 VASH1Q7L8A9 365 aaPredicted RBP9.91□□□□□ -0.82
SMC4-214ENST00000472991 LRRC43Q8N309 656 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 URGCPQ8TCY9 931 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 POMGNT1Q8WZA1 660 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 RPS6KC1Q96S38 1066 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 MSTO1Q9BUK6 570 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 CCDC94Q9BW85 323 aaPredicted RBP9.91□□□□□ -0.82
SMC4-214ENST00000472991 MRPL9Q9BYD2 267 aaKnown RBP9.91□□□□□ -0.82
SMC4-214ENST00000472991 GBP3Q9H0R5 595 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 CXCL16Q9H2A7 254 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 SLC28A3Q9HAS3 691 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 UBN1Q9NPG3 1134 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 FKBPLQ9UIM3 349 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 MAN1B1Q9UKM7 699 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 AGO2Q9UKV8 859 aaKnown RBP9.91□□□□□ -0.82
SMC4-214ENST00000472991 MAPK8IP1Q9UQF2 711 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 GIT1Q9Y2X7 761 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 STYXL1Q9Y6J8 313 aa9.91□□□□□ -0.82
SMC4-214ENST00000472991 BIN1O00499 593 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 TGFB1I1O43294 461 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 FAM189A1O60320 539 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 POMCP01189 267 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 LINC00271P0C7V0 271 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 CXCL8P10145 99 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 GARTP22102 1010 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 YARSP54577 528 aaKnown RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 INSM1Q01101 510 aaPredicted RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 KNOP1Q1ED39 458 aaKnown RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 GLRA4Q5JXX5 417 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 SPOUT1Q5T280 376 aaKnown RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 ZNF658Q5TYW1 1059 aaPredicted RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 HS2ST1Q7LGA3 356 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 ZSWIM2Q8NEG5 633 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 NOC3LQ8WTT2 800 aaKnown RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 SAAL1Q96ER3 474 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 SNX27Q96L92 541 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 ACAP3Q96P50 834 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 TGS1Q96RS0 853 aaKnown RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 CBWD1Q9BRT8 395 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 C17orf80Q9BSJ5 609 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 PCIF1Q9H4Z3 704 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 CWH43Q9H720 699 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 CERS4Q9HA82 394 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 AGPAT3Q9NRZ7 376 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 TOPORSQ9NS56 1045 aaPredicted RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 TYW1Q9NV66 732 aaKnown RBP9.9□□□□□ -0.82
SMC4-214ENST00000472991 TBC1D13Q9NVG8 400 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 MIOSQ9NXC5 875 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 MTUS1Q9ULD2 1270 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 PLAGL2Q9UPG8 496 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 TSC2P49815 1807 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 SZT2Q5T011 3432 aa9.9□□□□□ -0.82
SMC4-214ENST00000472991 CDH23Q9H251 3354 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 TMEM265A0A087WTH1 108 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 GOLGA8IPA6NC78 632 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 GOLGA8JA6NMD2 632 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 H3BM21 787 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 PTGESO14684 152 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 CLIC2O15247 247 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 INPPL1O15357 1258 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 MEFVO15553 781 aaPredicted RBP9.89□□□□□ -0.83
SMC4-214ENST00000472991 B4GALT3O60512 393 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 ZC3H11AO75152 810 aaKnown RBP eCLIP9.89□□□□□ -0.834e-12■■■■■ 110
SMC4-214ENST00000472991 KIF20AO95235 890 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 CLTAP09496 248 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 CTNNB1P35222 781 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 PRCPP42785 496 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 ACOT2P49753 483 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
SMC4-214ENST00000472991 GRIK3Q13003 919 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 MORC3Q14149 939 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 KYAT1Q16773 422 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 GUF1Q8N442 669 aaKnown RBP9.89□□□□□ -0.83
SMC4-214ENST00000472991 MEIOBQ8N635 442 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 GSTCDQ8NEC7 633 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 RSPH1Q8WYR4 309 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 CLP1Q92989 425 aaKnown RBP9.89□□□□□ -0.83
SMC4-214ENST00000472991 TTYH1Q9H313 450 aaPredicted RBP9.89□□□□□ -0.83
SMC4-214ENST00000472991 KCTD10Q9H3F6 313 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 ZNF576Q9H609 170 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 RPF1Q9H9Y2 349 aaKnown RBP9.89□□□□□ -0.83
SMC4-214ENST00000472991 HSPBP1Q9NZL4 362 aa9.89□□□□□ -0.83
SMC4-214ENST00000472991 CPSF3Q9UKF6 684 aaKnown RBP9.89□□□□□ -0.83
SMC4-214ENST00000472991 PRRC2BQ5JSZ5 2229 aaKnown RBP9.88□□□□□ -0.83
SMC4-214ENST00000472991 SOBPA7XYQ1 873 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms