RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 MEFVO15553 781 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-211ENST00000472490 EFEMP2O95967 443 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 LRPAP1P30533 357 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 PPP1R2P41236 205 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 DSG1Q02413 1049 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 SOX4Q06945 474 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-211ENST00000472490 SPAG1Q07617 926 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 HYAL1Q12794 435 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 MYBPC2Q14324 1141 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 DUSP6Q16828 381 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 ZNF658Q5TYW1 1059 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-211ENST00000472490 FAM171A1Q5VUB5 890 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 SPATA1Q5VX52 437 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 EP400NLQ6ZTU2 488 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 EFHBQ8N7U6 833 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 HASPINQ8TF76 798 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 C18orf25Q96B23 403 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-211ENST00000472490 FBXL18Q96ME1 805 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 TTPALQ9BTX7 342 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 GPR62Q9BZJ7 368 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 CHST7Q9NS84 486 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 CLDND1Q9NY35 253 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 CACNG4Q9UBN1 327 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 GOLGA8IPA6NC78 632 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 GOLGA8JA6NMD2 632 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 F8W810 466 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 PER2O15055 1255 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 CLIC2O15247 247 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 EXOC3O60645 756 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 CYP2J2P51589 502 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 STIM1Q13586 685 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 COL19A1Q14993 1142 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 PTPN14Q15678 1187 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 SNRNP35Q16560 246 aaKnown RBP15.39■□□□□ 0.05
BRCA1-211ENST00000472490 ELMSAN1Q6PJG2 1045 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-211ENST00000472490 ADGRD2Q7Z7M1 963 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 CEP57Q86XR8 500 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 SLC9A9Q8IVB4 645 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.39■□□□□ 0.05
BRCA1-211ENST00000472490 VN1R3Q9BXE9 311 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 KCTD10Q9H3F6 313 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 UBE2ZQ9H832 354 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-211ENST00000472490 TUBGCP4Q9UGJ1 667 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 DPP7Q9UHL4 492 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 TRAF3IP3Q9Y228 551 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 FRMD4BQ9Y2L6 1034 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
BRCA1-211ENST00000472490 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
BRCA1-211ENST00000472490 CHD7Q9P2D1 2997 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-211ENST00000472490 ARHGEF37A1IGU5 675 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 C2CD2LO14523 706 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 ADH1AP07327 375 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 NFICP08651 508 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 RPL13P26373 211 aaKnown RBP15.38■□□□□ 0.05
BRCA1-211ENST00000472490 MCM4P33991 863 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 NDUFV1P49821 464 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 MRPS5P82675 430 aaKnown RBP15.38■□□□□ 0.05
BRCA1-211ENST00000472490 CTC1Q2NKJ3 1217 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 COBLL1Q53SF7 1204 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 KIAA0319Q5VV43 1072 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 USP37Q86T82 979 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 RIN2Q8WYP3 895 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-211ENST00000472490 CASP10Q92851 521 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 FNBP1Q96RU3 617 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 DPP3Q9NY33 737 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 SSUH2Q9Y2M2 353 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 TCHHQ07283 1943 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 KIAA1671Q9BY89 1806 aa15.38■□□□□ 0.05
BRCA1-211ENST00000472490 HAX1O00165 279 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 SYN3O14994 580 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 LILRB3O75022 631 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 C1RP00736 705 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 NR3C1P04150 777 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 TMEM191BP0C7N4 346 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 KCNA5P22460 613 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 FGFR3P22607 806 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 KLRC2P26717 231 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 PNPLA4P41247 253 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 TFAMQ00059 246 aaKnown RBP15.37■□□□□ 0.05
BRCA1-211ENST00000472490 ADAM15Q13444 863 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 NFIL3Q16649 462 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 PUS10Q3MIT2 529 aaKnown RBP15.37■□□□□ 0.05
BRCA1-211ENST00000472490 TMEM184AQ6ZMB5 413 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 ANKS3Q6ZW76 656 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 TAS1R1Q7RTX1 841 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 CBWD2Q8IUF1 395 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 C3orf58Q8NDZ4 430 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 APPL2Q8NEU8 664 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 AUTS2Q8WXX7 1259 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 ANKRD36BP1Q96IX9 119 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 KLHL5Q96PQ7 755 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 RXFP1Q9HBX9 757 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 FNIP2Q9P278 1114 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 FAM50BQ9Y247 325 aa15.37■□□□□ 0.05
BRCA1-211ENST00000472490 CLASP2O75122 1294 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms