RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CYP3A5P20815 502 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 LRPAP1P30533 357 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 CA8P35219 290 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 NRIP1P48552 1158 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 ZNF658Q5TYW1 1059 aaPredicted RBP21.43■■□□□ 1.02
HDAC7-220ENST00000471235 SPATA1Q5VX52 437 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 DCLRE1AQ6PJP8 1040 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 PPP2R3CQ969Q6 453 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 B3GALT6Q96L58 329 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 MAN1B1Q9UKM7 699 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 C2CD2Q9Y426 696 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 PDXKO00764 312 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 URODP06132 367 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 RPL9P32969 192 aaKnown RBP21.42■■□□□ 1.02
HDAC7-220ENST00000471235 GLUD2P49448 558 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 COL19A1Q14993 1142 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 DUSP6Q16828 381 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 MRPL43Q8N983 215 aaKnown RBP21.42■■□□□ 1.02
HDAC7-220ENST00000471235 XXYLT1Q8NBI6 393 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 BEST2Q8NFU1 509 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 KIAA1586Q9HCI6 787 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 IRAK3Q9Y616 596 aa21.42■■□□□ 1.02
HDAC7-220ENST00000471235 ZNF233A6NK53 670 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 CXCL14O95715 111 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 NR3C1P04150 777 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 BRCC3P46736 316 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 BMS1Q14692 1282 aaKnown RBP21.41■■□□□ 1.02
HDAC7-220ENST00000471235 SNRNP35Q16560 246 aaKnown RBP21.41■■□□□ 1.02
HDAC7-220ENST00000471235 COBLL1Q53SF7 1204 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 RBM23Q86U06 439 aaKnown RBP21.41■■□□□ 1.02
HDAC7-220ENST00000471235 IGFLR1Q9H665 355 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 TLE6Q9H808 572 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 PDE11AQ9HCR9 933 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 CHST7Q9NS84 486 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 DMAC2Q9NW81 257 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 TRAF3IP3Q9Y228 551 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 C2orf16Q68DN1 1984 aa21.41■■□□□ 1.02
HDAC7-220ENST00000471235 I3L4J1 428 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 PPEF2O14830 753 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 PER2O15055 1255 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 LINC01565O15544 149 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 CALUO43852 315 aaPredicted RBP21.4■■□□□ 1.02
HDAC7-220ENST00000471235 LILRB3O75022 631 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 PRCPP42785 496 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 DSG1Q02413 1049 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 ELAVL2Q12926 359 aaKnown RBP21.4■■□□□ 1.02
HDAC7-220ENST00000471235 USP41Q3LFD5 358 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 ZCWPW2Q504Y3 356 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 RTP2Q5QGT7 225 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 KIAA0319Q5VV43 1072 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 NT5DC4Q86YG4 428 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 SLC9A9Q8IVB4 645 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 PABPC5Q96DU9 382 aaKnown RBP21.4■■□□□ 1.02
HDAC7-220ENST00000471235 FAM84AQ96KN4 292 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 CLSTN2Q9H4D0 955 aa21.4■■□□□ 1.02
HDAC7-220ENST00000471235 MRPL17Q9NRX2 175 aaKnown RBP21.4■■□□□ 1.02
HDAC7-220ENST00000471235 PTPRJQ12913 1337 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 C2CD2LO14523 706 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 EXOC3O60645 756 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 GLP2RO95838 553 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 CYP24A1Q07973 514 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 CAMK4Q16566 473 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 CTC1Q2NKJ3 1217 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 FAM171A1Q5VUB5 890 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 ISM2Q6H9L7 571 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.39■■□□□ 1.01
HDAC7-220ENST00000471235 EFHBQ8N7U6 833 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 RDH13Q8NBN7 331 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 TMEM174Q8WUU8 243 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 CDCA3Q99618 268 aaPredicted RBP21.39■■□□□ 1.01
HDAC7-220ENST00000471235 UBE2ZQ9H832 354 aaPredicted RBP21.39■■□□□ 1.01
HDAC7-220ENST00000471235 CLDND1Q9NY35 253 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 THEGQ9P2T0 379 aa21.39■■□□□ 1.01
HDAC7-220ENST00000471235 TCF20Q9UGU0 1960 aaKnown RBP21.39■■□□□ 1.01
HDAC7-220ENST00000471235 GOLGA6L22H0YM25 854 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 TULP1O00294 542 aaPredicted RBP21.38■■□□□ 1.01
HDAC7-220ENST00000471235 CLASP2O75122 1294 aaKnown RBP21.38■■□□□ 1.01
HDAC7-220ENST00000471235 FGFR3P22607 806 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 MCM4P33991 863 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 TFAMQ00059 246 aaKnown RBP21.38■■□□□ 1.01
HDAC7-220ENST00000471235 MORC3Q14149 939 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 PSMD6Q15008 389 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 NFIL3Q16649 462 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 C9orf57Q5W0N0 161 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 KIAA1841Q6NSI8 718 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 VN1R2Q8NFZ6 395 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 RIN2Q8WYP3 895 aaPredicted RBP21.38■■□□□ 1.01
HDAC7-220ENST00000471235 TTPALQ9BTX7 342 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 GTPBP4Q9BZE4 634 aaKnown RBP21.38■■□□□ 1.01
HDAC7-220ENST00000471235 DPP3Q9NY33 737 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 SSX2IPQ9Y2D8 614 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 NUB1Q9Y5A7 615 aa21.38■■□□□ 1.01
HDAC7-220ENST00000471235 ANO9A1A5B4 782 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 BIN1O00499 593 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 NCK2O43639 380 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 TBX10O75333 385 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 CNPP09543 421 aaKnown RBP21.37■■□□□ 1.01
HDAC7-220ENST00000471235 BMP6P22004 513 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 TKTP29401 623 aaKnown RBP21.37■■□□□ 1.01
HDAC7-220ENST00000471235 CASP4P49662 377 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms