RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 CTNNB1P35222 781 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 OR1G1P47890 313 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 CLCNKBP51801 687 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 MARSP56192 900 aaKnown RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 MYL5Q02045 173 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 UPP1Q16831 310 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 TPD52L1Q16890 204 aaPredicted RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 DUOXA2Q1HG44 320 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 CCDC40Q4G0X9 1142 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 EPC2Q52LR7 807 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 C9orf57Q5W0N0 161 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 CD300LGQ6UXG3 332 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 DHX40Q8IX18 779 aaKnown RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 C1orf127Q8N9H9 656 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 C3orf58Q8NDZ4 430 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 BEST2Q8NFU1 509 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 CXorf38Q8TB03 319 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 UROC1Q96N76 676 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 SAMD11Q96NU1 681 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 PLVAPQ9BX97 442 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 NAT10Q9H0A0 1025 aaKnown RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 THAP9Q9H5L6 903 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 CERS4Q9HA82 394 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 METTL14Q9HCE5 456 aaKnown RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 AAASQ9NRG9 546 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 SAMSN1Q9NSI8 373 aaKnown RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 DPP3Q9NY33 737 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 SIX4Q9UIU6 781 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 MTUS1Q9ULD2 1270 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 FAN1Q9Y2M0 1017 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 RWDD3Q9Y3V2 267 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 NFE2L3Q9Y4A8 694 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 FNDC1Q4ZHG4 1894 aaPredicted RBP11.42□□□□□ -0.58
SMC1A-206ENST00000470241 LAMA3Q16787 3333 aa11.42□□□□□ -0.58
SMC1A-206ENST00000470241 ANO9A1A5B4 782 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 EPOPA6NHQ4 379 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 C5orf67F2Z3F1 127 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 PODXLO00592 558 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 PIRO00625 290 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 IKBKBO14920 756 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 KIF4AO95239 1232 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 ITGB1P05556 798 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 RB1P06400 928 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 TMEM191BP0C7N4 346 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 ALDH7A1P49419 539 aaKnown RBP11.41□□□□□ -0.58
SMC1A-206ENST00000470241 ZNF165P49910 485 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 ZNF445P59923 1031 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 PPP3CAQ08209 521 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 IQCB1Q15051 598 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 DCLRE1AQ6PJP8 1040 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 LRSAM1Q6UWE0 723 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 USP37Q86T82 979 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 TRIM59Q8IWR1 403 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 AOPEPQ8N6M6 819 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 KLHL23Q8NBE8 558 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 CACTINQ8WUQ7 758 aaKnown RBP11.41□□□□□ -0.58
SMC1A-206ENST00000470241 ARNTL2Q8WYA1 636 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 SLC35C1Q96A29 364 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
SMC1A-206ENST00000470241 IGSF21Q96ID5 467 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 ANKRD36BP1Q96IX9 119 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 CNOT6LQ96LI5 555 aaKnown RBP11.41□□□□□ -0.58
SMC1A-206ENST00000470241 COLEC11Q9BWP8 271 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 HSD3B7Q9H2F3 369 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 TTYH1Q9H313 450 aaPredicted RBP11.41□□□□□ -0.58
SMC1A-206ENST00000470241 ZNF576Q9H609 170 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 CBX8Q9HC52 389 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 SPG21Q9NZD8 308 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 PCDHB12Q9Y5F1 795 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 TRIOBPQ9H2D6 2365 aa11.41□□□□□ -0.58
SMC1A-206ENST00000470241 TMEM265A0A087WTH1 108 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 CARNS1A5YM72 827 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 TMEM189-UBE2V1I3L0A0 370 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 FGF18O76093 207 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 B3GAT3O94766 335 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 EFEMP2O95967 443 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 TNNC2P02585 160 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 ITGB3P05106 788 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 POLR2BP30876 1174 aaKnown RBP11.4□□□□□ -0.58
SMC1A-206ENST00000470241 PPM1AP35813 382 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 GCLMP48507 274 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 AP3M2P53677 418 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 PLCB3Q01970 1234 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 ZACNQ401N2 412 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 HSP90AA4PQ58FG1 418 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 DCAF17Q5H9S7 520 aaPredicted RBP11.4□□□□□ -0.58
SMC1A-206ENST00000470241 CDKAL1Q5VV42 579 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 TDRD10Q5VZ19 366 aaKnown RBP11.4□□□□□ -0.58
SMC1A-206ENST00000470241 C15orf39Q6ZRI6 1047 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 SV2AQ7L0J3 742 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 VN1R3Q9BXE9 311 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 TSPY26PQ9H489 355 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 ITGA11Q9UKX5 1188 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 AGAP1Q9UPQ3 857 aa11.4□□□□□ -0.58
SMC1A-206ENST00000470241 RALGAPA2Q2PPJ7 1873 aa11.4□□□□□ -0.59
SMC1A-206ENST00000470241 KCNJ18B7U540 433 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms