RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SPOUT1Q5T280 376 aaKnown RBP16.44■□□□□ 0.22
SNIP1-202ENST00000468040 ZNF280BQ86YH2 543 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 COLGALT2Q8IYK4 626 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 SLC35C1Q96A29 364 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 CWH43Q9H720 699 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 NRDE2Q9H7Z3 1164 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 DPP3Q9NY33 737 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 ITGA11Q9UKX5 1188 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 COLQQ9Y215 455 aaPredicted RBP16.44■□□□□ 0.22
SNIP1-202ENST00000468040 RWDD3Q9Y3V2 267 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 TRIP11Q15643 1979 aa16.44■□□□□ 0.22
SNIP1-202ENST00000468040 CASTOR2A6NHX0 329 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 N4BP1O75113 896 aaKnown RBP16.43■□□□□ 0.22
SNIP1-202ENST00000468040 ALDH2P05091 517 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 TPM2P07951 284 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 ALDH7A1P49419 539 aaKnown RBP16.43■□□□□ 0.22
SNIP1-202ENST00000468040 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
SNIP1-202ENST00000468040 MAN2A1Q16706 1144 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 C1orf220Q5T0J3 134 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 LMBRD2Q68DH5 695 aaPredicted RBP16.43■□□□□ 0.22
SNIP1-202ENST00000468040 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 CLP1Q92989 425 aaKnown RBP16.43■□□□□ 0.22
SNIP1-202ENST00000468040 PBX4Q9BYU1 374 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 HSD3B7Q9H2F3 369 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 TMEM8AQ9HCN3 771 aa16.43■□□□□ 0.22
SNIP1-202ENST00000468040 R3HCC1Q9Y3T6 440 aaKnown RBP16.43■□□□□ 0.22
SNIP1-202ENST00000468040 LCHNA4D1U4 455 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 PHACTR2O75167 634 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 CA3P07451 260 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 PRKCSHP14314 528 aaPredicted RBP16.42■□□□□ 0.22
SNIP1-202ENST00000468040 OR1G1P47890 313 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 GCLMP48507 274 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 MXI1P50539 228 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 BCAR1P56945 870 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 PPP3CAQ08209 521 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 BIRC3Q13489 604 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 ZACNQ401N2 412 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 KRT39Q6A163 491 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 SV2AQ7L0J3 742 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 TRAPPC11Q7Z392 1133 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 ZNF516Q92618 1163 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 TUBGCP2Q9BSJ2 902 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 GOLGA2P5Q9HBQ8 144 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 HCSTQ9UBK5 93 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 DNAJB4Q9UDY4 337 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 PCDHB12Q9Y5F1 795 aa16.42■□□□□ 0.22
SNIP1-202ENST00000468040 LINC01553A4QN01 128 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 PODXLO00592 558 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 B4GALT3O60512 393 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 AFPP02771 609 aaKnown RBP16.41■□□□□ 0.22
SNIP1-202ENST00000468040 C4BPAP04003 597 aaKnown RBP16.41■□□□□ 0.22
SNIP1-202ENST00000468040 ITGB3P05106 788 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 GALTP07902 379 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 MYOGP15173 224 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 PAX3P23760 479 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 PPM1AP35813 382 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 PBX2P40425 430 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 PNPLA4P41247 253 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 CLCNKBP51801 687 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 GUCY2FP51841 1108 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 RBP5P82980 135 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 CETN1Q12798 172 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 TRPC3Q13507 836 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 UPP1Q16831 310 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 TDRD10Q5VZ19 366 aaKnown RBP16.41■□□□□ 0.22
SNIP1-202ENST00000468040 C9orf57Q5W0N0 161 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 DCLRE1AQ6PJP8 1040 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 KCNT2Q6UVM3 1135 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 C15orf39Q6ZRI6 1047 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 ZNF560Q96MR9 790 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 SAMD11Q96NU1 681 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 COLEC11Q9BWP8 271 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 LIMA1Q9UHB6 759 aaKnown RBP16.41■□□□□ 0.22
SNIP1-202ENST00000468040 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 YBX2Q9Y2T7 364 aaKnown RBP16.41■□□□□ 0.22
SNIP1-202ENST00000468040 GBF1Q92538 1859 aa16.41■□□□□ 0.22
SNIP1-202ENST00000468040 ANO9A1A5B4 782 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 PIRO00625 290 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 NRP1O14786 923 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 PMM2O15305 246 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 P4HA2O15460 535 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 B3GAT3O94766 335 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 KRT19P08727 400 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 LINC00271P0C7V0 271 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 POLR2BP30876 1174 aaKnown RBP16.4■□□□□ 0.22
SNIP1-202ENST00000468040 SLC11A1P49279 550 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 FMO5P49326 533 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 MYL7Q01449 175 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 KRT31Q15323 416 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 VWA3BQ502W6 1294 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 LRRC52Q8N7C0 313 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 COLGALT1Q8NBJ5 622 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms