RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LSM12Q3MHD2 195 aaKnown RBP7.67□□□□□ -1.18
PTCD3-205ENST00000464541 UBE3BQ7Z3V4 1068 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 RAVER1Q8IY67 606 aaKnown RBP7.67□□□□□ -1.18
PTCD3-205ENST00000464541 TCEAL8Q8IYN2 117 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 NUP133Q8WUM0 1156 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 LENG9Q96B70 501 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 PACSIN1Q9BY11 444 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 WDCPQ9H6R7 721 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 JKAMPQ9P055 326 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 FAM20BO75063 409 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 SLC43A1O75387 559 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 RPS6KA4O75676 772 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 FTLP02792 175 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-205ENST00000464541 ANXA1P04083 346 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 LPOP22079 712 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-205ENST00000464541 SMARCA1P28370 1054 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 SLC4A10Q6U841 1118 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 GGNQ86UU5 652 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 TPH2Q8IWU9 490 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 ZFPM1Q8IX07 1006 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 AOPEPQ8N6M6 819 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 VRK1Q99986 396 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-205ENST00000464541 RNPEPQ9H4A4 650 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 RLIMQ9NVW2 624 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 G3BP2Q9UN86 482 aaKnown RBP7.66□□□□□ -1.18
PTCD3-205ENST00000464541 FZD1Q9UP38 647 aa7.66□□□□□ -1.18
PTCD3-205ENST00000464541 NT5C1B-RDH14C9J2C7 533 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 TSPAN6O43657 245 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 AP1G1O43747 822 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 ITGB1P05556 798 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 HLA-DOAP06340 250 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 CKBP12277 381 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 TACR2P21452 398 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 MAP2K6P52564 334 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 MXRA7P84157 204 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 SNAPC2Q13487 334 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 EPM2AIP1Q7L775 607 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-205ENST00000464541 GRAMD1CQ8IYS0 662 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 SYNE4Q8N205 404 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 OR56A1Q8NGH5 318 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 ZNF483Q8TF39 744 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-205ENST00000464541 DIS3LQ8TF46 1054 aaKnown RBP7.65□□□□□ -1.18
PTCD3-205ENST00000464541 HAS1Q92839 578 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 CLIP3Q96DZ5 547 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 MYEOVQ96EZ4 313 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 NEU1Q99519 415 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 ZNF341Q9BYN7 854 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 GSTO2Q9H4Y5 243 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 KLHL11Q9NVR0 708 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 USP15Q9Y4E8 981 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-205ENST00000464541 FPGT-TNNI3KV9GXZ4 949 aa7.65□□□□□ -1.18
PTCD3-205ENST00000464541 H3BML4 177 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 LAG3P18627 525 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 BMPR1AP36894 532 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 PDCD4Q53EL6 469 aaKnown RBP7.64□□□□□ -1.19
PTCD3-205ENST00000464541 B3GNT9Q6UX72 402 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 ZNF365Q70YC5 407 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 MAGEB6Q8N7X4 407 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 SLC35G2Q8TBE7 412 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 CDK5RAP3Q96JB5 506 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 PHACTR3Q96KR7 559 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 AKIP1Q9NQ31 210 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 KLHL42Q9P2K6 505 aa7.64□□□□□ -1.19
PTCD3-205ENST00000464541 FEZ2Q9UHY8 353 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-205ENST00000464541 CDHR4A6H8M9 788 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 MARCH11A6NNE9 402 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 F2RL2O00254 374 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 ZNF185O15231 689 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 SLC6A2P23975 617 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 DGCR2P98153 550 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 MINDY4Q4G0A6 757 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 TSHZ3Q63HK5 1081 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 LRRC55Q6ZSA7 311 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 RHOUQ7L0Q8 258 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 HEATR3Q7Z4Q2 680 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 PDSS2Q86YH6 399 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 MED15Q96RN5 788 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 LMBRD1Q9NUN5 540 aa7.63□□□□□ -1.19
PTCD3-205ENST00000464541 A0A1B0GTW7 788 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 ERC2O15083 957 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 FZD7O75084 574 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 CFIP05156 583 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 GNAI3P08754 354 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 SBK3P0C264 359 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 MAKP20794 623 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 PRDX5P30044 214 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 SLC6A4P31645 630 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 GNAI1P63096 354 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 ZNF267Q14586 743 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-205ENST00000464541 LRRC41Q15345 812 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 FLYWCH1Q4VC44 716 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 FNDC7Q5VTL7 733 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 FAM90A1Q86YD7 464 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 DENND1CQ8IV53 801 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 FAM43AQ8N2R8 423 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 TBC1D15Q8TC07 691 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 MTFMTQ96DP5 389 aaKnown RBP7.62□□□□□ -1.19
PTCD3-205ENST00000464541 TAAR9Q96RI9 348 aa7.62□□□□□ -1.19
PTCD3-205ENST00000464541 PNKPQ96T60 521 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms