RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 CCDC47Q96A33 483 aaKnown RBP13.13□□□□□ -0.31
HPS1-206ENST00000462743 CBWD1Q9BRT8 395 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 EMILIN2Q9BXX0 1053 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 IGFLR1Q9H665 355 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 EXOC1Q9NV70 894 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 CACNG4Q9UBN1 327 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 SCN1AP35498 2009 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 PODXLO00592 558 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 PDXKO00764 312 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 LINC01565O15544 149 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 URODP06132 367 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 CNPP09543 421 aaKnown RBP13.12□□□□□ -0.31
HPS1-206ENST00000462743 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
HPS1-206ENST00000462743 KCNA5P22460 613 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 TFF2Q03403 129 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
HPS1-206ENST00000462743 MYBPC2Q14324 1141 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 SURF1Q15526 300 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 FAM171A1Q5VUB5 890 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 KIAA1841Q6NSI8 718 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 PDXDC1Q6P996 788 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
HPS1-206ENST00000462743 SLC9A9Q8IVB4 645 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 GOLGA5Q8TBA6 731 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 HDAC7Q8WUI4 952 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 AUTS2Q8WXX7 1259 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 C18orf25Q96B23 403 aaPredicted RBP13.12□□□□□ -0.31
HPS1-206ENST00000462743 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 SUSD3Q96L08 255 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 TTPALQ9BTX7 342 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 KCTD10Q9H3F6 313 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 GOLGA2P5Q9HBQ8 144 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 AGPAT3Q9NRZ7 376 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 CUL9Q8IWT3 2517 aa13.12□□□□□ -0.31
HPS1-206ENST00000462743 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 PIRO00625 290 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 SYN3O14994 580 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 TBX10O75333 385 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 KIF20AO95235 890 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 PAPLNO95428 1278 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 IGFBP6P24592 240 aaPredicted RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 AARSP49588 968 aaKnown RBP eCLIP13.11□□□□□ -0.31
HPS1-206ENST00000462743 CREMQ03060 361 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 LILRA6Q6PI73 481 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 HS2ST1Q7LGA3 356 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 GUF1Q8N442 669 aaKnown RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 C3orf58Q8NDZ4 430 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 CASP10Q92851 521 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 IPO9Q96P70 1041 aaKnown RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 GSDMAQ96QA5 445 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 FAM213AQ9BRX8 229 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
HPS1-206ENST00000462743 DMAC2Q9NW81 257 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 HSPBP1Q9NZL4 362 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 HCFC2Q9Y5Z7 792 aa13.11□□□□□ -0.31
HPS1-206ENST00000462743 TEX28O15482 410 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 ADH1AP07327 375 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 NDUFV1P49821 464 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 UBE2HP62256 183 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 SPAG1Q07617 926 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 TMEM132DQ14C87 1099 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 NFIL3Q16649 462 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 ANKRD54Q6NXT1 300 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 XXYLT1Q8NBI6 393 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
HPS1-206ENST00000462743 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
HPS1-206ENST00000462743 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 CLSTN3Q9BQT9 956 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 PCIF1Q9H4Z3 704 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 TUBGCP4Q9UGJ1 667 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 CD207Q9UJ71 328 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
HPS1-206ENST00000462743 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 FAM50BQ9Y247 325 aa13.1□□□□□ -0.31
HPS1-206ENST00000462743 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 H3BQ06 376 aaPredicted RBP13.09□□□□□ -0.31
HPS1-206ENST00000462743 M0QZQ0 153 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms