RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 MTMR12Q9C0I1 747 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 INTS13Q9NVM9 706 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 C5orf67F2Z3F1 127 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 PPEF2O14830 753 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 TRIM49P0CI25 452 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 TRIM49CP0CI26 452 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 EPB41P11171 864 aaKnown RBP20.8■□□□□ 0.92
XPA-202ENST00000462523 CYP3A5P20815 502 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 CTNNB1P35222 781 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 OR1G1P47890 313 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 VAMP7P51809 220 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 TFAMQ00059 246 aaKnown RBP20.8■□□□□ 0.92
XPA-202ENST00000462523 INTS8Q75QN2 995 aaKnown RBP20.8■□□□□ 0.92
XPA-202ENST00000462523 NT5DC4Q86YG4 428 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 SLC39A11Q8N1S5 342 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 C1orf127Q8N9H9 656 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 ENOX1Q8TC92 643 aaKnown RBP20.8■□□□□ 0.92
XPA-202ENST00000462523 TMC2Q8TDI7 906 aa20.8■□□□□ 0.92
XPA-202ENST00000462523 PRG3Q9Y2Y8 225 aaPredicted RBP20.8■□□□□ 0.92
XPA-202ENST00000462523 REV3LO60673 3130 aa20.79■□□□□ 0.92
XPA-202ENST00000462523 KIF4AO95239 1232 aa20.79■□□□□ 0.92
XPA-202ENST00000462523 LRPAP1P30533 357 aa20.79■□□□□ 0.92
XPA-202ENST00000462523 ALDH7A1P49419 539 aaKnown RBP20.79■□□□□ 0.92
XPA-202ENST00000462523 NCAPHQ15003 741 aa20.79■□□□□ 0.92
XPA-202ENST00000462523 SURF1Q15526 300 aa20.79■□□□□ 0.92
XPA-202ENST00000462523 FNBP1Q96RU3 617 aa20.79■□□□□ 0.92
XPA-202ENST00000462523 ZNF576Q9H609 170 aa20.79■□□□□ 0.92
XPA-202ENST00000462523 PODXLO00592 558 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 ALDH2P05091 517 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 SCN1AP35498 2009 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 MARSP56192 900 aaKnown RBP20.78■□□□□ 0.92
XPA-202ENST00000462523 KLHL23Q8NBE8 558 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 BEST2Q8NFU1 509 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 UROC1Q96N76 676 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 VN1R3Q9BXE9 311 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 SAMSN1Q9NSI8 373 aaKnown RBP20.78■□□□□ 0.92
XPA-202ENST00000462523 DPP3Q9NY33 737 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 SIX4Q9UIU6 781 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 FAN1Q9Y2M0 1017 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 RWDD3Q9Y3V2 267 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 NFE2L3Q9Y4A8 694 aa20.78■□□□□ 0.92
XPA-202ENST00000462523 ANO9A1A5B4 782 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 EFEMP2O95967 443 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 TNNI1P19237 187 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 ENPEPQ07075 957 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 PPP3CAQ08209 521 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 C9orf57Q5W0N0 161 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 FRMD5Q7Z6J6 570 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 HASPINQ8TF76 798 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 ARNTL2Q8WYA1 636 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 IGSF21Q96ID5 467 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 SAMD11Q96NU1 681 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 BPIFA3Q9BQP9 254 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 PLVAPQ9BX97 442 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 HSD3B7Q9H2F3 369 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 AAASQ9NRG9 546 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 ARMCX3Q9UH62 379 aaPredicted RBP20.77■□□□□ 0.92
XPA-202ENST00000462523 PCDHB12Q9Y5F1 795 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 ATG2AQ2TAZ0 1938 aa20.77■□□□□ 0.92
XPA-202ENST00000462523 PIRO00625 290 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 XPOTO43592 962 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 FGF18O76093 207 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 TMEM191BP0C7N4 346 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 KRT13P13646 458 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 MYL5Q02045 173 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 DUOXA2Q1HG44 320 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 HSP90AA4PQ58FG1 418 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 TDRD10Q5VZ19 366 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 C15orf39Q6ZRI6 1047 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 DHX40Q8IX18 779 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 SLC35C1Q96A29 364 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 CNOT6LQ96LI5 555 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 THAP9Q9H5L6 903 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 SPG21Q9NZD8 308 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 EYSQ5T1H1 3165 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 TMEM265A0A087WTH1 108 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 RFXAPO00287 272 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 IKBKBO14920 756 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 C4BPAP04003 597 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 ITGB3P05106 788 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 DNAJB1P25685 340 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 RPL9P32969 192 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 FXR1P51114 621 aaKnown RBP eCLIP20.76■□□□□ 0.91
XPA-202ENST00000462523 CCDC40Q4G0X9 1142 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 TRAPPC11Q7Z392 1133 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 TRIM59Q8IWR1 403 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 AOPEPQ8N6M6 819 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 FBXO22Q8NEZ5 403 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 CACTINQ8WUQ7 758 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 DDX27Q96GQ7 796 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 ANKRD36BP1Q96IX9 119 aa20.76■□□□□ 0.91
XPA-202ENST00000462523 ALG13Q9NP73 1137 aaKnown RBP20.76■□□□□ 0.91
XPA-202ENST00000462523 H3BNC9 293 aa20.75■□□□□ 0.91
XPA-202ENST00000462523 TMEM189-UBE2V1I3L0A0 370 aa20.75■□□□□ 0.91
XPA-202ENST00000462523 B3GAT3O94766 335 aa20.75■□□□□ 0.91
XPA-202ENST00000462523 FGFR1OPO95684 399 aaKnown RBP20.75■□□□□ 0.91
XPA-202ENST00000462523 GNA14O95837 355 aa20.75■□□□□ 0.91
XPA-202ENST00000462523 RB1P06400 928 aa20.75■□□□□ 0.91
XPA-202ENST00000462523 POLR2BP30876 1174 aaKnown RBP20.75■□□□□ 0.91
XPA-202ENST00000462523 PPM1AP35813 382 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms