RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FAM186BQ8IYM0 893 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 SPICE1Q8N0Z3 855 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 LILRA3Q8N6C8 439 aaPredicted RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 ENAHQ8N8S7 591 aaPredicted RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 OR5M3Q8NGP4 307 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 ANKS1AQ92625 1134 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 MBD6Q96DN6 1003 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 APIPQ96GX9 242 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 C22orf23Q9BZE7 217 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 SIK2Q9H0K1 926 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 C11orf54Q9H0W9 315 aaPredicted RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 VPS11Q9H270 941 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 BHMT2Q9H2M3 363 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 NELFAQ9H3P2 528 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 PNPLA8Q9NP80 782 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 IL23AQ9NPF7 189 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 CHST12Q9NRB3 414 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 ING3Q9NXR8 418 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 FAM30AQ9NZY2 134 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 RHPN2P1A8MT19 583 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 PPFIA2O75334 1257 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 SLPIP03973 132 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 AMY1AP04745 511 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 MYBP10242 640 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 SLC5A1P13866 664 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ALOX15P16050 662 aaPredicted RBP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ZKSCAN1P17029 563 aaPredicted RBP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ATP5JP18859 108 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 PRDX5P30044 214 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 RPS19P39019 145 aaKnown RBP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 PIK3CGP48736 1102 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ADAM8P78325 824 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ATP2C1P98194 919 aaPredicted RBP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 APBA1Q02410 837 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 HABP2Q14520 560 aaPredicted RBP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 SLC44A4Q53GD3 710 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 PRAMEF14Q5SWL7 426 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 APOA5Q6Q788 366 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ARHGEF18Q6ZSZ5 1173 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 DOK3Q7L591 496 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 LGI4Q8N135 537 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 OR14K1Q8NGZ2 314 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 KBTBD7Q8WVZ9 684 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 DDX17Q92841 729 aaKnown RBP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 PHKBQ93100 1093 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ARL8AQ96BM9 186 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 MSLNLQ96KJ4 702 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 DMRTA2Q96SC8 542 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 RBM15Q96T37 977 aaKnown RBP eCLIP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 COLEC11Q9BWP8 271 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 UNKQ9C0B0 810 aaKnown RBP3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ENKD1Q9H0I2 346 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 STARD7Q9NQZ5 370 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 CFAP97Q9P2B7 532 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 OGDHLQ9ULD0 1010 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 OAZ3Q9UMX2 235 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 ZDHHC9Q9Y397 364 aa3.75□□□□□ -1.81
HDAC6-212ENST00000461608 LOC102724159A0A0B4J2E5 919 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 A0A1W2PRX2 142 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 NT5C1B-RDH14C9J2C7 533 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 MYO1FO00160 1098 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 IPO13O94829 963 aaKnown RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 HAUS5O94927 633 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 AMHP03971 560 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 GNAI2P04899 355 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 CD1AP06126 327 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 SETSIPP0DME0 302 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 RAP2AP10114 183 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 EN2P19622 333 aaPredicted RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 MGAT1P26572 445 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 ACVRL1P37023 503 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 ALDH5A1P51649 535 aaPredicted RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 MXRA7P84157 204 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 MRPL49Q13405 166 aaKnown RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 RIN1Q13671 783 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 PWP2Q15269 919 aaKnown RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 ZRSR2Q15696 482 aaKnown RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 RNF151Q2KHN1 245 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 GRAMD1BQ3KR37 738 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 FLYWCH1Q4VC44 716 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 METTL24Q5JXM2 366 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 DGKKQ5KSL6 1271 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 SWSAP1Q6NVH7 229 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 SRLQ86TD4 932 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 FAM90A1Q86YD7 464 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 PDSS2Q86YH6 399 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 MYLK4Q86YV6 388 aaPredicted RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 OR2C3Q8N628 320 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 SHCBP1Q8NEM2 672 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 IL17RDQ8NFM7 739 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 DEPTORQ8TB45 409 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 CFHR4Q92496 578 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 VRK1Q99986 396 aaPredicted RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 TCF25Q9BQ70 676 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 NAA15Q9BXJ9 866 aaKnown RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 PACSIN1Q9BY11 444 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 ZMAT3Q9HA38 289 aaKnown RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 KIAA1586Q9HCI6 787 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 ARFGAP3Q9NP61 516 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 PLCB1Q9NQ66 1216 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms