RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 LETM1O95202 739 aaPredicted RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 ITGB1P05556 798 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 DLATP10515 647 aaKnown RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 EPB41P11171 864 aaKnown RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 PLCB3Q01970 1234 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 GPM6BQ13491 265 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 UPP1Q16831 310 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 LMBRD2Q68DH5 695 aaPredicted RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 WDR49Q8IV35 697 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 CSGALNACT2Q8N6G5 542 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 DDX27Q96GQ7 796 aaKnown RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 TMEM169Q96HH4 297 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 CEP63Q96MT8 703 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 CGRRF1Q99675 332 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 COLEC11Q9BWP8 271 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 GZF1Q9H116 711 aaPredicted RBP16.97■□□□□ 0.31
RBM39-219ENST00000453310 PRDM12Q9H4Q4 367 aa16.97■□□□□ 0.31
RBM39-219ENST00000453310 SLC16A3O15427 465 aaKnown RBP16.96■□□□□ 0.31
RBM39-219ENST00000453310 KIF4AO95239 1232 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 TMEM191BP0C7N4 346 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 ERCC5P28715 1186 aaPredicted RBP16.96■□□□□ 0.31
RBM39-219ENST00000453310 LRPAP1P30533 357 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 TYRO3Q06418 890 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 CT47A1Q5JQC4 288 aaPredicted RBP16.96■□□□□ 0.31
RBM39-219ENST00000453310 INTS8Q75QN2 995 aaKnown RBP16.96■□□□□ 0.31
RBM39-219ENST00000453310 DEFB123Q8N688 67 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 PLEKHO2Q8TD55 490 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 PARD3BQ8TEW8 1205 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 HASPINQ8TF76 798 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 CACTINQ8WUQ7 758 aaKnown RBP16.96■□□□□ 0.31
RBM39-219ENST00000453310 ANKRD36BP1Q96IX9 119 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 FAM84AQ96KN4 292 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 MED15Q96RN5 788 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 MTMR12Q9C0I1 747 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 ALG13Q9NP73 1137 aaKnown RBP16.96■□□□□ 0.31
RBM39-219ENST00000453310 INTS13Q9NVM9 706 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 DPP3Q9NY33 737 aa16.96■□□□□ 0.31
RBM39-219ENST00000453310 LRRIQ3A6PVS8 624 aaPredicted RBP16.95■□□□□ 0.3
RBM39-219ENST00000453310 TMEM189-UBE2V1I3L0A0 370 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 GRM6O15303 877 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 LPXNO60711 386 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 B3GAT3O94766 335 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 KRT13P13646 458 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 TNNI1P19237 187 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 KRT17Q04695 432 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 UBE3AQ05086 875 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 BFSP1Q12934 665 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 DCLRE1AQ6PJP8 1040 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 USP37Q86T82 979 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 C3orf58Q8NDZ4 430 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 OR5B17Q8NGF7 314 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 SPPL3Q8TCT6 385 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 TMC2Q8TDI7 906 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 BORCS6Q96GS4 357 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 POP1Q99575 1024 aaKnown RBP16.95■□□□□ 0.3
RBM39-219ENST00000453310 ADAM28Q9UKQ2 775 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 LZTS1Q9Y250 596 aa16.95■□□□□ 0.3
RBM39-219ENST00000453310 SYCE3A1L190 88 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 TADA2AO75478 443 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 TNNC2P02585 160 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 IGFBP6P24592 240 aaPredicted RBP16.94■□□□□ 0.3
RBM39-219ENST00000453310 VAMP7P51809 220 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 DLG4P78352 724 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 CLDN10P78369 228 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 ENPEPQ07075 957 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 DUOXA2Q1HG44 320 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 ZSCAN23Q3MJ62 389 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 C9orf57Q5W0N0 161 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 FUT10Q6P4F1 479 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 C11orf57Q6ZUT1 292 aaPredicted RBP16.94■□□□□ 0.3
RBM39-219ENST00000453310 FILIP1Q7Z7B0 1213 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 C1orf127Q8N9H9 656 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 POF1BQ8WVV4 589 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 VN1R3Q9BXE9 311 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
RBM39-219ENST00000453310 PUF60Q9UHX1 559 aaKnown RBP16.94■□□□□ 0.3
RBM39-219ENST00000453310 ITGA11Q9UKX5 1188 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 TRANK1O15050 2925 aa16.94■□□□□ 0.3
RBM39-219ENST00000453310 SF3B1O75533 1304 aaKnown RBP eCLIP16.94■□□□□ 0.31e-6■■■□□ 14.6
RBM39-219ENST00000453310 ANO9A1A5B4 782 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 PPEF2O14830 753 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
RBM39-219ENST00000453310 ITGB3P05106 788 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 TRIM49P0CI25 452 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 TRIM49CP0CI26 452 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 DNAJB1P25685 340 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 POLR2BP30876 1174 aaKnown RBP16.93■□□□□ 0.3
RBM39-219ENST00000453310 TPD52L1Q16890 204 aaPredicted RBP16.93■□□□□ 0.3
RBM39-219ENST00000453310 C1orf220Q5T0J3 134 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 CD300LGQ6UXG3 332 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 DDX53Q86TM3 631 aaKnown RBP16.93■□□□□ 0.3
RBM39-219ENST00000453310 FUCA2Q9BTY2 467 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 LMAN2LQ9H0V9 348 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 DNAJC25Q9H1X3 360 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 MTMR10Q9NXD2 777 aa16.93■□□□□ 0.3
RBM39-219ENST00000453310 ATG2AQ2TAZ0 1938 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 PIRO00625 290 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms