RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PRSS36Q5K4E3 855 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 HAUS3Q68CZ6 603 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 ELMOD1Q8N336 334 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 ST13P5Q8NFI4 369 aaPredicted RBP15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 NETO1Q8TDF5 533 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 ING5Q8WYH8 240 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 MCRS1Q96EZ8 462 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 CNTNAP3BQ96NU0 1288 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 CNTNAP3Q9BZ76 1288 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 GPR88Q9GZN0 384 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 TRPV4Q9HBA0 871 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 GJB4Q9NTQ9 266 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 USP18Q9UMW8 372 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 KMT2BQ9UMN6 2715 aaPredicted RBP15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 ACACBO00763 2458 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 ARHGEF35A5YM69 484 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 CTDNEP1O95476 244 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 PSMC3P17980 439 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 TGM1P22735 817 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 FCARP24071 287 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 TKTP29401 623 aaKnown RBP15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 ANAPC15P60006 121 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 CYP4A22Q5TCH4 519 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 ATF7IP2Q5U623 682 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 TANGO2Q6ICL3 276 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 IQCEQ6IPM2 695 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 PDZD4Q76G19 769 aaPredicted RBP15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 MAEAQ7L5Y9 396 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 MAP4K3Q8IVH8 894 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 SMARCD2Q92925 531 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 ASB16Q96NS5 453 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 CCDC94Q9BW85 323 aaPredicted RBP15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 OXCT2Q9BYC2 517 aaPredicted RBP15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 TPCN1Q9ULQ1 816 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 TNFSF13BQ9Y275 285 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 GDAQ9Y2T3 454 aa15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 TPRP12270 2363 aaKnown RBP15.7■□□□□ 0.1
LYSMD3-202ENST00000453259 SMIM28A0A1B0GU29 152 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 TTLL13PA6NNM8 815 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 PAPSS2O95340 614 aaPredicted RBP15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 RETP07949 1114 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 ADRB1P08588 477 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 CEBPBP17676 345 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 GRM5P41594 1212 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 DIS3L2Q8IYB7 885 aaKnown RBP15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 BSNDQ8WZ55 320 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 DDX1Q92499 740 aaKnown RBP15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 INSL5Q9Y5Q6 135 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 STK24Q9Y6E0 443 aa15.69■□□□□ 0.1
LYSMD3-202ENST00000453259 COL4A3Q01955 1670 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 WDR27A2RRH5 827 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 SHISA7A6NL88 538 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 BTBD18B2RXH4 712 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 SLC30A4O14863 429 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 FDPSP14324 419 aaKnown RBP15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 KCNE1P15382 129 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 EPHA5P54756 1037 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 MRPL58Q14197 206 aaKnown RBP15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 LRRC32Q14392 662 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 FAM78AQ5JUQ0 283 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 EEF1DP3Q658K8 133 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 ALKAL1Q6UXT8 129 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 FAM3CQ92520 227 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 CORO1BQ9BR76 489 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 PLA2G2FQ9BZM2 168 aa15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 ZNF334Q9HCZ1 680 aaPredicted RBP15.68■□□□□ 0.1
LYSMD3-202ENST00000453259 K7ERI5 159 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 MED24O75448 989 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 GLRA4Q5JXX5 417 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 ZNF280DQ6N043 979 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 TSSK4Q6SA08 328 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 SPEM1Q8N4L4 309 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 C3orf58Q8NDZ4 430 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 APPL2Q8NEU8 664 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 GTF3C6Q969F1 213 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 ZNF512Q96ME7 567 aaPredicted RBP15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 CXCL16Q9H2A7 254 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 CYP4F11Q9HBI6 524 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 AFF4Q9UHB7 1163 aaKnown RBP15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 KCNG1Q9UIX4 513 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 NUB1Q9Y5A7 615 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 PIAS3Q9Y6X2 628 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 COL4A2P08572 1712 aa15.67■□□□□ 0.1
LYSMD3-202ENST00000453259 F5P12259 2224 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 PODXLO00592 558 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 ZNF263O14978 683 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 MCF2P10911 925 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 HOXA6P31267 233 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 CXCL12P48061 93 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 PLD1Q13393 1074 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 CSRP2Q16527 193 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 NT5DC1Q5TFE4 455 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 MFSD6LQ8IWD5 586 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 SUSD3Q96L08 255 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms