RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 THEGQ9P2T0 379 aa15.21■□□□□ 0.03
GTF3C3-206ENST00000448539 TUBGCP4Q9UGJ1 667 aa15.21■□□□□ 0.03
GTF3C3-206ENST00000448539 C2CD2Q9Y426 696 aa15.21■□□□□ 0.03
GTF3C3-206ENST00000448539 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
GTF3C3-206ENST00000448539 FSD2A1L4K1 749 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 TMEM189-UBE2V1I3L0A0 370 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 PDXKO00764 312 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 NFICP08651 508 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 GLUD2P49448 558 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 STIM1Q13586 685 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 SURF1Q15526 300 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 USP41Q3LFD5 358 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 RBM23Q86U06 439 aaKnown RBP15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 NT5DC4Q86YG4 428 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 MRPL43Q8N983 215 aaKnown RBP15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 ZSWIM2Q8NEG5 633 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 SPATA20Q8TB22 786 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 CDCA3Q99618 268 aaPredicted RBP15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 EMILIN2Q9BXX0 1053 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 KCTD10Q9H3F6 313 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 LMBRD1Q9NUN5 540 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 PCDHGC5Q9Y5F6 944 aa15.2■□□□□ 0.02
GTF3C3-206ENST00000448539 PRRC2BQ5JSZ5 2229 aaKnown RBP15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 C2CD2LO14523 706 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 NR3C1P04150 777 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 RPL13P26373 211 aaKnown RBP15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 LRPAP1P30533 357 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 NRIP1P48552 1158 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 TFAMQ00059 246 aaKnown RBP15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 ZBTB6Q15916 424 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 SNRNP35Q16560 246 aaKnown RBP15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 CAMK4Q16566 473 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 FAM171A1Q5VUB5 890 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 SPATA1Q5VX52 437 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 ADGRD2Q7Z7M1 963 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 CEP57Q86XR8 500 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 CBWD2Q8IUF1 395 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 SMYD4Q8IYR2 804 aaPredicted RBP15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 ATXN2LQ8WWM7 1075 aaKnown RBP15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 AUTS2Q8WXX7 1259 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 FNBP1Q96RU3 617 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 GPR62Q9BZJ7 368 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 MAN1B1Q9UKM7 699 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 FRMD4BQ9Y2L6 1034 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 CITO14578 2027 aa15.19■□□□□ 0.02
GTF3C3-206ENST00000448539 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 C2orf71A6NGG8 1288 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 HIDE1A8MVS5 230 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 PER2O15055 1255 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 TMEM191BP0C7N4 346 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 SRGAP2BP0DMP2 458 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 MCM4P33991 863 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 PPP1R2P41236 205 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 GUCY2FP51841 1108 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 DSG1Q02413 1049 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 HYAL1Q12794 435 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 PTPN14Q15678 1187 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 ISM2Q6H9L7 571 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 TAS1R1Q7RTX1 841 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 RIN2Q8WYP3 895 aaPredicted RBP15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 HLA-CQ95604 372 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 FBXL18Q96ME1 805 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 ASB2Q96Q27 587 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 TSG101Q99816 390 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 TTPALQ9BTX7 342 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 PDE11AQ9HCR9 933 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 DPP3Q9NY33 737 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 CLDND1Q9NY35 253 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 COG5Q9UP83 839 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 TRAF3IP3Q9Y228 551 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 IRAK3Q9Y616 596 aa15.18■□□□□ 0.02
GTF3C3-206ENST00000448539 BIN1O00499 593 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 PSMA7O14818 248 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 EFEMP2O95967 443 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 TNNC2P02585 160 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 DLATP10515 647 aaKnown RBP15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 PRCPP42785 496 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 MRPS5P82675 430 aaKnown RBP15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 CREMQ03060 361 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 CYP24A1Q07973 514 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 DUSP6Q16828 381 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 COBLL1Q53SF7 1204 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 PDXDC1Q6P996 788 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 EFCAB13Q8IY85 973 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 EFHBQ8N7U6 833 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 C3orf58Q8NDZ4 430 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 PABPC5Q96DU9 382 aaKnown RBP15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 ANKRD36BP1Q96IX9 119 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 NUP62CLQ9H1M0 184 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 CLSTN2Q9H4D0 955 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
GTF3C3-206ENST00000448539 ADH1AP07327 375 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms