RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SLC16A3O15427 465 aaKnown RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 LINC01565O15544 149 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 MEFVO15553 781 aaPredicted RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 ITGB1P05556 798 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 DLATP10515 647 aaKnown RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 KRT13P13646 458 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 AFF1P51825 1210 aaKnown RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 WNT7BP56706 349 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 CYP24A1Q07973 514 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 HSP90AA2PQ14568 343 aaPredicted RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 CLUL1Q15846 466 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 CTC1Q2NKJ3 1217 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 GLRA4Q5JXX5 417 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 CLLU1OSQ5K130 101 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 LMBRD2Q68DH5 695 aaPredicted RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 FOXR2Q6PJQ5 311 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 GLB1LQ6UWU2 654 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 FILIP1Q7Z7B0 1213 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 BRSK2Q8IWQ3 736 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 CMTR2Q8IYT2 770 aaKnown RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 ABI1Q8IZP0 508 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 FAM200AQ8TCP9 573 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 SNX27Q96L92 541 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 CNOT6LQ96LI5 555 aaKnown RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 FBXL18Q96ME1 805 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 LMAN2LQ9H0V9 348 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 MAGEC2Q9UBF1 373 aaPredicted RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 PLAGL2Q9UPG8 496 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 GIT1Q9Y2X7 761 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 RWDD3Q9Y3V2 267 aa18.66■□□□□ 0.58
LIME1-202ENST00000444951 FNDC1Q4ZHG4 1894 aaPredicted RBP18.66■□□□□ 0.58
LIME1-202ENST00000444951 ARL5CA6NH57 179 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 TBKBP1A7MCY6 615 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 OFD1O75665 1012 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 CAVIN2O95810 425 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 POMCP01189 267 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 IRS1P35568 1242 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 SCNN1GP51170 649 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 NCAPHQ15003 741 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 IQCB1Q15051 598 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 DCAF17Q5H9S7 520 aaPredicted RBP18.65■□□□□ 0.58
LIME1-202ENST00000444951 TMEM31Q5JXX7 168 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 TCERG1LQ5VWI1 586 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 ADGRD2Q7Z7M1 963 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 KIF12Q96FN5 646 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 FAM84AQ96KN4 292 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 POP1Q99575 1024 aaKnown RBP18.65■□□□□ 0.58
LIME1-202ENST00000444951 THAP9Q9H5L6 903 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 MMRN2Q9H8L6 949 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 UBN1Q9NPG3 1134 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 HCSTQ9UBK5 93 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 ARMCX3Q9UH62 379 aaPredicted RBP18.65■□□□□ 0.58
LIME1-202ENST00000444951 PCDHGC5Q9Y5F6 944 aa18.65■□□□□ 0.58
LIME1-202ENST00000444951 TTC26A0AVF1 554 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 GOLGA6L19H0YKK7 550 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 IKBKBO14920 756 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 TBX10O75333 385 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 IL18RAPO95256 599 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 TRIM49P0CI25 452 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 TRIM49CP0CI26 452 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.57
LIME1-202ENST00000444951 MTIF2P46199 727 aaKnown RBP18.64■□□□□ 0.57
LIME1-202ENST00000444951 JADE1Q6IE81 842 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 GAS2L3Q86XJ1 694 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 IRF2BP1Q8IU81 584 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 FAM114A1Q8IWE2 563 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 KLHL23Q8NBE8 558 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 SPPL3Q8TCT6 385 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 URGCPQ8TCY9 931 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 PLEKHO2Q8TD55 490 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 TMEM174Q8WUU8 243 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 MFSD14AQ96MC6 490 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 FNBP1Q96RU3 617 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 MKNK1Q9BUB5 465 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 PLVAPQ9BX97 442 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 IGFLR1Q9H665 355 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 MIOSQ9NXC5 875 aa18.64■□□□□ 0.57
LIME1-202ENST00000444951 TRIOO75962 3097 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 KCNJ18B7U540 433 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 HOXA2O43364 376 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 GPR37L1O60883 481 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 GNA14O95837 355 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 NFICP08651 508 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 TNNI1P19237 187 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 CDK11BP21127 795 aaKnown RBP18.63■□□□□ 0.57
LIME1-202ENST00000444951 VAMP7P51809 220 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 TPM4P67936 248 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 DLG4P78352 724 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 TFAMQ00059 246 aaKnown RBP18.63■□□□□ 0.57
LIME1-202ENST00000444951 ZP2Q05996 745 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 KCNJ12Q14500 433 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 PSMD6Q15008 389 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 NOMO2Q5JPE7 1267 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 INTS8Q75QN2 995 aaKnown RBP18.63■□□□□ 0.57
LIME1-202ENST00000444951 TMEM130Q8N3G9 435 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 ZMAT2Q96NC0 199 aaKnown RBP18.63■□□□□ 0.57
LIME1-202ENST00000444951 CASD1Q96PB1 797 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 PLEKHA5Q9HAU0 1116 aa18.63■□□□□ 0.57
LIME1-202ENST00000444951 SMIM28A0A1B0GU29 152 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms