RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ACRV1P26436 265 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 CHN2P52757 468 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 EFEMP1Q12805 493 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 RRP1BQ14684 758 aaKnown RBP6.22□□□□□ -1.41
PFDN4-202ENST00000441080 SYT12Q8IV01 421 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 IL17RDQ8NFM7 739 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 B3GNT5Q9BYG0 378 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 TMEM60Q9H2L4 133 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 ARMT1Q9H993 441 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 PNPOQ9NVS9 261 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 FAM30AQ9NZY2 134 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 CDHR4A6H8M9 788 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 DRGXA6NNA5 263 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 ITGB1P05556 798 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 SLC6A2P23975 617 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 PRDX5P30044 214 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 SLC6A4P31645 630 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 APOBEC3AP31941 199 aaPredicted RBP6.21□□□□□ -1.42
PFDN4-202ENST00000441080 RAB1AP62820 205 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 NKX6-1P78426 367 aaPredicted RBP6.21□□□□□ -1.42
PFDN4-202ENST00000441080 PLS1Q14651 629 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 R3HDM1Q15032 1099 aaKnown RBP6.21□□□□□ -1.42
PFDN4-202ENST00000441080 LLGL1Q15334 1064 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 SPATS1Q496A3 300 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 ANO6Q4KMQ2 910 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 PPP4R4Q6NUP7 873 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 MED25Q71SY5 747 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 GSTO2Q9H4Y5 243 aa6.21□□□□□ -1.42
PFDN4-202ENST00000441080 SIDT1Q9NXL6 827 aaKnown RBP6.21□□□□□ -1.42
PFDN4-202ENST00000441080 EIF2B4Q9UI10 523 aaKnown RBP6.21□□□□□ -1.42
PFDN4-202ENST00000441080 A0A088AWK7 358 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 A6NNZ2 444 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 PRC1O43663 620 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 GNAI3P08754 354 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 ZNF20P17024 532 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 PIK3CGP48736 1102 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 AGFG1P52594 562 aaKnown RBP6.2□□□□□ -1.42
PFDN4-202ENST00000441080 GNAI1P63096 354 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 ADAM17P78536 824 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 NHLH2Q02577 135 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 CCDC93Q567U6 631 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 NPNTQ6UXI9 565 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 NOL8Q76FK4 1167 aaKnown RBP6.2□□□□□ -1.42
PFDN4-202ENST00000441080 FAM90A1Q86YD7 464 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 FITM2Q8N6M3 262 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 PLBD2Q8NHP8 589 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 BRIX1Q8TDN6 353 aaKnown RBP6.2□□□□□ -1.42
PFDN4-202ENST00000441080 TIFAQ96CG3 184 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 C1orf43Q9BWL3 253 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 REXO4Q9GZR2 422 aaKnown RBP6.2□□□□□ -1.42
PFDN4-202ENST00000441080 SLAMF7Q9NQ25 335 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 AURKAIP1Q9NWT8 199 aaPredicted RBP6.2□□□□□ -1.42
PFDN4-202ENST00000441080 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 TESMINQ9Y4I5 508 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 PCDHA1Q9Y5I3 950 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 XDHP47989 1333 aa6.2□□□□□ -1.42
PFDN4-202ENST00000441080 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 CAPN8A6NHC0 703 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 LEFTY2O00292 366 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 SLC43A1O75387 559 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 GNALP38405 381 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 TBX4P57082 545 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 FGL2Q14314 439 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 ZNF365Q70YC5 407 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 CHST15Q7LFX5 561 aaPredicted RBP6.19□□□□□ -1.42
PFDN4-202ENST00000441080 SRGAP1Q7Z6B7 1085 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 PPP1R3BQ86XI6 285 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 KIAA0319LQ8IZA0 1049 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 AOPEPQ8N6M6 819 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 TBC1D15Q8TC07 691 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 TNPO1Q92973 898 aaKnown RBP6.19□□□□□ -1.42
PFDN4-202ENST00000441080 C1QTNF3Q9BXJ4 246 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 MRPL46Q9H2W6 279 aaKnown RBP6.19□□□□□ -1.42
PFDN4-202ENST00000441080 SARS2Q9NP81 518 aaKnown RBP6.19□□□□□ -1.42
PFDN4-202ENST00000441080 STAP2Q9UGK3 403 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 SORCS3Q9UPU3 1222 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 TSC22D4Q9Y3Q8 395 aa6.19□□□□□ -1.42
PFDN4-202ENST00000441080 TPP1O14773 563 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 TRIM24O15164 1050 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 RECQL4O94761 1208 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 SCAF4O95104 1147 aaKnown RBP6.18□□□□□ -1.42
PFDN4-202ENST00000441080 USP14P54578 494 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 RNASE9P60153 205 aaKnown RBP6.18□□□□□ -1.42
PFDN4-202ENST00000441080 GPSM2P81274 684 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 HLTFQ14527 1009 aaKnown RBP eCLIP6.18□□□□□ -1.42
PFDN4-202ENST00000441080 CDSNQ15517 529 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 USP39Q53GS9 565 aaKnown RBP6.18□□□□□ -1.42
PFDN4-202ENST00000441080 SPDYAQ5MJ70 313 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 UTP14CQ5TAP6 766 aaKnown RBP6.18□□□□□ -1.42
PFDN4-202ENST00000441080 CCDC149Q6ZUS6 474 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 PRRT2Q7Z6L0 340 aaPredicted RBP6.18□□□□□ -1.42
PFDN4-202ENST00000441080 TMPRSS6Q8IU80 811 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 TTC17Q96AE7 1141 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 DCLRE1CQ96SD1 692 aaKnown RBP6.18□□□□□ -1.42
PFDN4-202ENST00000441080 BRD9Q9H8M2 597 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 CNNM1Q9NRU3 951 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 CFAP97Q9P2B7 532 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 CPA4Q9UI42 421 aa6.18□□□□□ -1.42
PFDN4-202ENST00000441080 SLC45A2Q9UMX9 530 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms