RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GNAI1P63096 354 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 NKX6-1P78426 367 aaPredicted RBP4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 CCSAPQ6IQ19 270 aaPredicted RBP4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 OVCH2Q7RTZ1 564 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 FAM43AQ8N2R8 423 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 BRIX1Q8TDN6 353 aaKnown RBP4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 SLC35A4Q96G79 324 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 C8orf49Q96NF6 230 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 WWC2-AS2Q96NR7 200 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 GSTO2Q9H4Y5 243 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 JKAMPQ9P055 326 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 CFAP97Q9P2B7 532 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 ST6GALNAC2Q9UJ37 374 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 ZDHHC8Q9ULC8 765 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 CAPN8A6NHC0 703 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 LRRC14BA6NHZ5 514 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 DRGXA6NNA5 263 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 NT5C1B-RDH14C9J2C7 533 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 HAUS5O94927 633 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 ZBED1O96006 694 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 SPATA31D3P0C874 917 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 ACRV1P26436 265 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 PRDX5P30044 214 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 PIK3CGP48736 1102 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 FAM193AP78312 1265 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 PLS1Q14651 629 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 RRP1BQ14684 758 aaKnown RBP4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 ZNF585AQ6P3V2 769 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 DARS2Q6PI48 645 aaKnown RBP4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 NPNTQ6UXI9 565 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 SPATA31D4Q6ZUB0 917 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 MED25Q71SY5 747 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 UBE3BQ7Z3V4 1068 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 C11orf96Q7Z7L8 435 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 PDSS2Q86YH6 399 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 KIAA0319LQ8IZA0 1049 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 SH2D3CQ8N5H7 860 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 DCBLD1Q8N8Z6 715 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 PPP1R35Q8TAP8 253 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 DDX17Q92841 729 aaKnown RBP4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 MYOCQ99972 504 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 C1QTNF3Q9BXJ4 246 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 CPEB1Q9BZB8 566 aaKnown RBP4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 SIK2Q9H0K1 926 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 MRPL46Q9H2W6 279 aaKnown RBP4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 BRD9Q9H8M2 597 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 EIF2B4Q9UI10 523 aaKnown RBP4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 L1RE1Q9UN81 338 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 ATP11BQ9Y2G3 1177 aa4.77□□□□□ -1.65
LSM1P1-201ENST00000438629 KLRG2A4D1S0 409 aaPredicted RBP4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 WNT10BO00744 389 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 TRIM24O15164 1050 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 MYL1P05976 194 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 CKBP12277 381 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 GNALP38405 381 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 SCNN1GP51170 649 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 RAB1AP62820 205 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 MXRA7P84157 204 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 PURAQ00577 322 aaKnown RBP4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 EFEMP1Q12805 493 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 GRM3Q14832 879 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 CCDC93Q567U6 631 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 Q6ZRM9 215 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 ZNF365Q70YC5 407 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 MAEAQ7L5Y9 396 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 FAM90A1Q86YD7 464 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 TMPRSS6Q8IU80 811 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 CCAR1Q8IX12 1150 aaKnown RBP4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 RNF169Q8NCN4 708 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 NUP133Q8WUM0 1156 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 LRFN3Q9BTN0 628 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 PIH1D1Q9NWS0 290 aaKnown RBP4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 PARPBPQ9NWS1 579 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 TSC22D4Q9Y3Q8 395 aa4.76□□□□□ -1.65
LSM1P1-201ENST00000438629 A0A1W2PPL8 197 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 GOLIM4O00461 696 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 PHGDHO43175 533 aaKnown RBP4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 MGEA5O60502 916 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 PPFIA4O75335 1185 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 GNAI2P04899 355 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 CHN2P52757 468 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 TBX4P57082 545 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 NHLH2Q02577 135 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 KIF22Q14807 665 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 LLGL1Q15334 1064 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 KHDC1LQ5JSQ8 128 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 UTP14CQ5TAP6 766 aaKnown RBP4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 EMC10Q5UCC4 262 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 RNF220Q5VTB9 566 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 C1QL3Q5VWW1 255 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 CCDC149Q6ZUS6 474 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 RHOT2Q8IXI1 618 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 TBC1D15Q8TC07 691 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 TNPO1Q92973 898 aaKnown RBP4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 SCAMP4Q969E2 229 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 PGBD4Q96DM1 585 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 SUCLG2Q96I99 432 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 PHACTR3Q96KR7 559 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms