RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NT5C1AQ9BXI3 368 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 ZFATQ9P243 1243 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 P4HA2O15460 535 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 UGP2Q16851 508 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 ANKEF1Q9NU02 776 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 STAT4Q14765 748 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 C4orf22Q6V702 233 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 DCP1BQ8IZD4 617 aaKnown RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 MUTP22033 750 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 CCDC15Q0P6D6 951 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 MAPRE1Q15691 268 aaKnown RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 BEND6Q5SZJ8 279 aaPredicted RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 ITM2BQ9Y287 266 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 SLC16A10Q8TF71 515 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 DCCP43146 1447 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 RHOBTB3O94955 611 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 SLC18A3Q16572 532 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 GRAMD1BQ3KR37 738 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 MUC3BQ9H195 1237 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 COG4Q9H9E3 785 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 CCL15-CCL14A0A0B4J2E2 113 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 SYCE1LA8MT33 242 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ATXN8OSP0DMR3 200 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 CCL15Q16663 113 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ZBTB41Q5SVQ8 909 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 SLC26A7Q8TE54 656 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 BTBD6Q96KE9 485 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ELAC2Q9BQ52 826 aaKnown RBP16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ANKRD26Q9UPS8 1709 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 TLR2O60603 784 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 KRT16P08779 473 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 PNMA6AP0CW24 399 aaPredicted RBP16.69■□□□□ 0.26
PTPN13-204ENST00000436978 TYK2P29597 1187 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
PTPN13-204ENST00000436978 GGCXP38435 758 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 NBPF9Q3BBW0 867 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 PHF2O75151 1096 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 NTSR2O95665 410 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 FBXO33Q7Z6M2 555 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 CCNYL1Q8N7R7 359 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 SH3BP1Q9Y3L3 701 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 MEI1Q5TIA1 1274 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 SAMD3Q8N6K7 520 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ING2Q9H160 280 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 EFCAB14O75071 495 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ALDH1A3P47895 512 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 WASHC5Q12768 1159 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 NKX1-1Q15270 411 aaPredicted RBP16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ODC1P11926 461 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 GLYCTKQ8IVS8 523 aa16.69■□□□□ 0.26
PTPN13-204ENST00000436978 ZBTB17Q13105 803 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 ARHGAP15Q53QZ3 475 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 DDIASQ8IXT1 998 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 PCDHGB4Q9UN71 923 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 ABCE1P61221 599 aaKnown RBP16.68■□□□□ 0.26
PTPN13-204ENST00000436978 ZNF211Q13398 564 aaPredicted RBP16.68■□□□□ 0.26
PTPN13-204ENST00000436978 EFCAB12Q6NXP0 572 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 SMAPO00193 183 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 ANLNQ9NQW6 1124 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 GUCY2CP25092 1073 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 PDAP1Q13442 181 aaKnown RBP16.68■□□□□ 0.26
PTPN13-204ENST00000436978 PID1Q7Z2X4 250 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 ZNF668Q96K58 619 aaPredicted RBP16.68■□□□□ 0.26
PTPN13-204ENST00000436978 C17orf102A2RUQ5 167 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 EEF2KO00418 725 aaKnown RBP16.68■□□□□ 0.26
PTPN13-204ENST00000436978 SLC35G2Q8TBE7 412 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 SLC13A1Q9BZW2 595 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 MRFAP1Q9Y605 127 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 ADGRG1Q9Y653 693 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 CFAP69A5D8W1 941 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 MTSS1O43312 755 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 SKIV2LQ15477 1246 aaKnown RBP16.68■□□□□ 0.26
PTPN13-204ENST00000436978 C1orf146Q5VVC0 180 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 SDE2Q6IQ49 451 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 GPRASP2Q96D09 838 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 SNX9Q9Y5X1 595 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 ACOT2P49753 483 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 MCEEQ96PE7 176 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 SELENONQ9NZV5 590 aa16.68■□□□□ 0.26
PTPN13-204ENST00000436978 KDM1AO60341 852 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 ZC3H18Q86VM9 953 aaKnown RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 FOXP3Q9BZS1 431 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 CHCHD3Q9NX63 227 aaKnown RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 NR3C2P08235 984 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 HSPA9P38646 679 aaKnown RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 HARS2P49590 506 aaKnown RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 FBXO38Q6PIJ6 1188 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
PTPN13-204ENST00000436978 TEKT4Q8WW24 435 aa16.67■□□□□ 0.26
PTPN13-204ENST00000436978 AIPL1Q9NZN9 384 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms