RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 HGFACQ04756 655 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 KRT72Q14CN4 511 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 SURF1Q15526 300 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 DACT2Q5SW24 774 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 IZUMO3Q5VZ72 239 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 ZNF761Q86XN6 746 aaPredicted RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 LILRA3Q8N6C8 439 aaPredicted RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 IPCEF1Q8WWN9 437 aaPredicted RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 DDX17Q92841 729 aaKnown RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 DACT3Q96B18 629 aaPredicted RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 MRI1Q9BV20 369 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 VPS11Q9H270 941 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 ATP6V0A4Q9HBG4 840 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 SACM1LQ9NTJ5 587 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 TRMT13Q9NUP7 481 aaKnown RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 RLIMQ9NVW2 624 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 SLC4A7Q9Y6M7 1214 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 FFAR3O14843 346 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 AMHP03971 560 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 THP07101 528 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 FPR1P21462 350 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 CASP5P51878 434 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 MESP2Q0VG99 397 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 MRPL49Q13405 166 aaKnown RBP7.23□□□□□ -1.25
USP54-206ENST00000433394 RAB32Q13637 225 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 DAG1Q14118 895 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 CCDC93Q567U6 631 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 EMC10Q5UCC4 262 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 MFSD5Q6N075 450 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 ARHGEF18Q6ZSZ5 1173 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 SEM1Q6ZVN7 128 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 IL17RDQ8NFM7 739 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 ZFP28Q8NHY6 868 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 PPM1EQ8WY54 764 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 LTV1Q96GA3 475 aaPredicted RBP7.23□□□□□ -1.25
USP54-206ENST00000433394 NELFAQ9H3P2 528 aa7.23□□□□□ -1.25
USP54-206ENST00000433394 A0A1B0GTL3 188 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 hCG_1642624A0A1W2PR95 340 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 UBE2QL1A1L167 161 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 NT5C1B-RDH14C9J2C7 533 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 MYO1FO00160 1098 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 NUAK1O60285 661 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 POMCP01189 267 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 ANXA1P04083 346 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 C1QTNF9P0C862 333 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 NPR1P16066 1061 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 KCNC1P48547 511 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 PPM1FP49593 454 aaPredicted RBP7.22□□□□□ -1.25
USP54-206ENST00000433394 CLRN1P58418 232 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 NOMO3P69849 1222 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 FMO1Q01740 532 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 TNFAIP2Q03169 654 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 RIN1Q13671 783 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 RNF151Q2KHN1 245 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 FAM209BQ5JX69 171 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 DGKKQ5KSL6 1271 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 FAM83BQ5T0W9 1011 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 ZNF529Q6P280 563 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 PPP1R3BQ86XI6 285 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 FAM90A1Q86YD7 464 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 ADGRG2Q8IZP9 1017 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 LGI4Q8N135 537 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 SCLT1Q96NL6 688 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 GPHA2Q96T91 129 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 HERPUD2Q9BSE4 406 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 CD320Q9NPF0 282 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.22□□□□□ -1.25
USP54-206ENST00000433394 SRRDQ9UH36 339 aa7.22□□□□□ -1.25
USP54-206ENST00000433394 MAGED2Q9UNF1 606 aaPredicted RBP7.22□□□□□ -1.25
USP54-206ENST00000433394 ZMYM3Q14202 1370 aa7.21□□□□□ -1.25
USP54-206ENST00000433394 PRR5-ARHGAP8B1AHC4 643 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 CDC14BO60729 498 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 HAUS5O94927 633 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 AHSGP02765 367 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 GNAT2P19087 354 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 TECP42680 631 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 TRAPPC10P48553 1259 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 MAPK10P53779 464 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 RAP2BP61225 183 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 POU6F2P78424 691 aaPredicted RBP7.21□□□□□ -1.26
USP54-206ENST00000433394 SATB1Q01826 763 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 EXOSC9Q06265 439 aaKnown RBP7.21□□□□□ -1.26
USP54-206ENST00000433394 ZNF543Q08ER8 600 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 RAPGEF1Q13905 1077 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 TBR1Q16650 682 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 C4orf46Q504U0 113 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 PRR16Q569H4 304 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 LMBRD2Q68DH5 695 aaPredicted RBP7.21□□□□□ -1.26
USP54-206ENST00000433394 BEND5Q7L4P6 421 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 FAM83AQ86UY5 434 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 SDR16C5Q8N3Y7 309 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 ANKRD42Q8N9B4 389 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 PCSK9Q8NBP7 692 aaKnown RBP7.21□□□□□ -1.26
USP54-206ENST00000433394 POF1BQ8WVV4 589 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 BRI3BPQ8WY22 251 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 USP40Q9NVE5 1235 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 JKAMPQ9P055 326 aa7.21□□□□□ -1.26
USP54-206ENST00000433394 CPNE7Q9UBL6 633 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms