RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 IZUMO3Q5VZ72 239 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 MICU3Q86XE3 530 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 KBTBD2Q8IY47 623 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 GPR135Q8IZ08 494 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 NKAPQ8N5F7 415 aaKnown RBP3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 POU5F2Q8N7G0 328 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 FBXO18Q8NFZ0 1043 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLC35B2Q8TB61 432 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 STON2Q8WXE9 905 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 TRIM43Q96BQ3 446 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 SUCLG2Q96I99 432 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 CDC5LQ99459 802 aaKnown RBP3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 MYOCQ99972 504 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 GDF15Q99988 308 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 LSM14BQ9BX40 385 aaKnown RBP3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 KIAA1586Q9HCI6 787 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 PIH1D1Q9NWS0 290 aaKnown RBP3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 GPRC5BQ9NZH0 403 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 CPNE7Q9UBL6 633 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 FAM184BQ9ULE4 1060 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 PCDHA1Q9Y5I3 950 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 HOXA3O43365 443 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 STC2O76061 302 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 SASH1O94885 1247 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 IL18RAPO95256 599 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 HDCP19113 662 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLC7A1P30825 629 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 TRAPPC10P48553 1259 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 EPHB4P54760 987 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 SUMO3P55854 103 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 SOX8P57073 446 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 KCNA10Q16322 511 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 BMT2Q1RMZ1 405 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 CCDC93Q567U6 631 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 CCDC157Q569K6 752 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 KHDC1LQ5JSQ8 128 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 ANKS6Q68DC2 871 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF365Q70YC5 407 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 PDSS2Q86YH6 399 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 SH2D3CQ8N5H7 860 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 KIAA1191Q96A73 305 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 RPL10LQ96L21 214 aaKnown RBP3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 P2RX7Q99572 595 aaKnown RBP3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 MRI1Q9BV20 369 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 MEGF9Q9H1U4 602 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 SEC61A2Q9H9S3 476 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 GPR35Q9HC97 309 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 SARS2Q9NP81 518 aaKnown RBP3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 JKAMPQ9P055 326 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 PCDHA6Q9UN73 950 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 CORO2BQ9UQ03 480 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 NR2E1Q9Y466 385 aa3.89□□□□□ -1.79
HMGB1P27-201ENST00000431429 UBE2QL1A1L167 161 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 B5MCH6 92 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 DNAJB5O75953 348 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 SNRPA1P09661 255 aaKnown RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 MTHFD1P11586 935 aaKnown RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 SMARCA1P28370 1054 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 PPM1AP35813 382 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 STT3AP46977 705 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 PTH1RQ03431 593 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 EXOSC9Q06265 439 aaKnown RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 CHAF1AQ13111 956 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 STK3Q13188 491 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 FAM209BQ5JX69 171 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 METTL24Q5JXM2 366 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 KRT40Q6A162 431 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 OGFOD2Q6N063 350 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 HIBCHQ6NVY1 386 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 TMEM151BQ8IW70 566 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 OR5M3Q8NGP4 307 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 EVI5LQ96CN4 794 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 NEIL1Q96FI4 390 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 FMNL2Q96PY5 1086 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 CRB3Q9BUF7 120 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 BRIP1Q9BX63 1249 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 GNL3LQ9NVN8 582 aaKnown RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 MYO1AQ9UBC5 1043 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 AFF4Q9UHB7 1163 aaKnown RBP3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 OAZ3Q9UMX2 235 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZDHHC9Q9Y397 364 aa3.88□□□□□ -1.79
HMGB1P27-201ENST00000431429 A0A087WWL8 130 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 POM121BA6NF01 834 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 TBKBP1A7MCY6 615 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 CLCA1A8K7I4 914 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 PIP5K1CO60331 668 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 FOSP01100 380 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 FGAP02671 866 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 AMHP03971 560 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 ANXA1P04083 346 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 THP07101 528 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 RARBP10826 455 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 IL1R1P14778 569 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 BRAFP15056 766 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 ATP5JP18859 108 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 NPEPPSP55786 919 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 CLRN1P58418 232 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 KIAA2012Q0VF49 1180 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 PMS2P11Q13670 270 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLC35G1Q2M3R5 365 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms