RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 UBE2TQ9NPD8 197 aaPredicted RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 SAR1AQ9NR31 198 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 TAS2R1Q9NYW7 299 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 HIBADHP31937 336 aaKnown RBP11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 PSMC2P35998 433 aaKnown RBP11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 HADHBP55084 474 aaKnown RBP11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 KIF22Q14807 665 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 GRIK5Q16478 980 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 USP17L6PQ6QN14 398 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 TTC7BQ86TV6 843 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 ARHGEF19Q8IW93 802 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 NCSTNQ92542 709 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 KAT5Q92993 513 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 SMC6Q96SB8 1091 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 TRAIPQ9BWF2 469 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 HEMGNQ9BXL5 484 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 KCNQ5Q9NR82 932 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 SCN7AQ01118 1682 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 PDLIM1O00151 329 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 RNASEH1O60930 286 aaKnown RBP11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 ADRA1DP25100 572 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 SERPINB3P29508 390 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 MYL7Q01449 175 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 LSAMPQ13449 338 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 PTK6Q13882 451 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 FASTKD3Q14CZ7 662 aaKnown RBP11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 CFAP157Q5JU67 520 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 IZUMO3Q5VZ72 239 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 LCA5Q86VQ0 697 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 RBM12BQ8IXT5 1001 aaKnown RBP11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 NSL1Q96IY1 281 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 SAYSD1Q9NPB0 183 aa11.76□□□□□ -0.53
SEMA4D-209ENST00000429836 SHANK3Q9BYB0 1731 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 UMODL1Q5DID0 1318 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 SPATA31A1Q5TZJ5 1347 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 MYO3BQ8WXR4 1341 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 SGPL1O95470 568 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 BAG2O95816 211 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC16A2P36021 539 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 MAGEA4P43358 317 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 BPIFB4P59827 614 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 ZBTB16Q05516 673 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 FYB2Q5VWT5 728 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 PHLDB2Q86SQ0 1253 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 PSPC1Q8WXF1 523 aaKnown RBP11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 NMD3Q96D46 503 aaKnown RBP11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 FAM161BQ96MY7 647 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 RBM15Q96T37 977 aaKnown RBP eCLIP11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 TTC1Q99614 292 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 BHMT2Q9H2M3 363 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 ARMCX1Q9P291 453 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 ZNF212Q9UDV6 495 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 SNED1Q8TER0 1413 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 FSCN2O14926 492 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 OR6B1O95007 311 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 PGM1P36871 562 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 CDK7P50613 346 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 NR1H3Q13133 447 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 TTBK2Q6IQ55 1244 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 RGS9BPQ6ZS82 235 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 ZNF804AQ7Z570 1209 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 ARHGAP18Q8N392 663 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 RIBC1Q8N443 379 aaPredicted RBP11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 FBXO27Q8NI29 283 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 CLPTM1LQ96KA5 538 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 DNAJC1Q96KC8 554 aaKnown RBP11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 MAK16Q9BXY0 300 aaKnown RBP11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 DNM3Q9UQ16 869 aa11.75□□□□□ -0.53
SEMA4D-209ENST00000429836 PRPF4O43172 522 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SORBS3O60504 671 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 TBCAO75347 108 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ATP6V1G1O75348 118 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ZWINTO95229 277 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 GAS8O95995 478 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 PLS3P13797 630 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 GRIA2P42262 883 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 TMEM62Q0P6H9 643 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 GSTA3Q16772 222 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ERFEQ4G0M1 354 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC51AQ86UW1 340 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SLCO2A1Q92959 643 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ZNF653Q96CK0 615 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 HIC2Q96JB3 615 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms