RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SLC4A7Q9Y6M7 1214 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 MIF4GDA9UHW6 222 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 NCAM1P13591 858 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 PABPC5Q96DU9 382 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 DEUP1Q05D60 604 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 TMTC4Q5T4D3 741 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 TMEM199Q8N511 208 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 PYROXD1Q8WU10 500 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 RANBP17Q9H2T7 1088 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 FAM86B1E9PN63 330 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 GPC4O75487 556 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 FAM86B2P0C5J1 330 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 CDC26Q8NHZ8 85 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 MSRAQ9UJ68 235 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 TTC7AQ9ULT0 858 aaPredicted RBP18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 TMEM150BA6NC51 233 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 RRP9O43818 475 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 CIB2O75838 187 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 ZC3H18Q86VM9 953 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 MIB1Q86YT6 1006 aa18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 DHX38Q92620 1227 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-203ENST00000429416 SPDYE5A6NIY4 337 aa18.08■□□□□ 0.49
SMARCA4-203ENST00000429416 SERPINB6P35237 376 aa18.08■□□□□ 0.49
SMARCA4-203ENST00000429416 SLMAPQ14BN4 828 aa18.08■□□□□ 0.49
SMARCA4-203ENST00000429416 CBWD2Q8IUF1 395 aa18.08■□□□□ 0.49
SMARCA4-203ENST00000429416 AP1G2O75843 785 aa18.08■□□□□ 0.49
SMARCA4-203ENST00000429416 SMAD1Q15797 465 aaKnown RBP18.08■□□□□ 0.49
SMARCA4-203ENST00000429416 EPC2Q52LR7 807 aa18.08■□□□□ 0.49
SMARCA4-203ENST00000429416 GOLGA8MH3BSY2 632 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 TROVE2P10155 538 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 UBA1P22314 1058 aaKnown RBP18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 GTF2H1P32780 548 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 PID1Q7Z2X4 250 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 RHOT1Q8IXI2 618 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 CYP4F11Q9HBI6 524 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 KLHL11Q9NVR0 708 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 KANSL3Q9P2N6 904 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 TSR3Q9UJK0 312 aaKnown RBP18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 ZNF280DQ6N043 979 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 GPAT2Q6NUI2 795 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 TAS2R42Q7RTR8 314 aa18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 TIMM13Q9Y5L4 95 aaPredicted RBP18.08■□□□□ 0.48
SMARCA4-203ENST00000429416 PI4K2BG5E9Z4 385 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 OR6P1Q8NGX9 317 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 TBK1Q9UHD2 729 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 SNRPFP62306 86 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 RBBP5Q15291 538 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 SPRYD7Q5W111 196 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 ADAM2Q99965 735 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 NFKBIEO00221 500 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 MAP3K7O43318 606 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 MYL4P12829 197 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 NSUN2Q08J23 767 aaKnown RBP eCLIP18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 ARID5BQ14865 1188 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 CD302Q8IX05 232 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 STK33Q9BYT3 514 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 DOLKQ9UPQ8 538 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 TRPV2Q9Y5S1 764 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 USP2O75604 605 aaPredicted RBP18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 MBL2P11226 248 aaPredicted RBP18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 SLC9A1P19634 815 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 TAP1Q03518 808 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 ACOT1Q86TX2 421 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 FBXO32Q969P5 355 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 DPP7Q9UHL4 492 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 TTLL13PA6NNM8 815 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 BRD2P25440 801 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 TTC23LQ6PF05 361 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 MAGEB5Q9BZ81 275 aa18.07■□□□□ 0.48
SMARCA4-203ENST00000429416 TMED2Q15363 201 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 CBWD1Q9BRT8 395 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 EDEM3Q9BZQ6 932 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 HACD3Q9P035 362 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 CXCL8P10145 99 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 UCHL3P15374 230 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 AVPR1AP37288 418 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 RAB27AP51159 221 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 PRAMEP78395 509 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 ITPRIPL1Q6GPH6 555 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 PDXDC1Q6P996 788 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 CENPUQ71F23 418 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 USP33Q8TEY7 942 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 MCEEQ96PE7 176 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 ACADSBP45954 432 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 WDR35Q9P2L0 1181 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 PRR23AA6NEV1 266 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 RNF40O75150 1001 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 EPHB3P54753 998 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 ELAVL2Q12926 359 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 PKN1Q16512 942 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 ADGRF2Q8IZF7 708 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 MKL1Q969V6 931 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 MCUR1Q96AQ8 359 aa18.06■□□□□ 0.48
SMARCA4-203ENST00000429416 ATICP31939 592 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 CASP4P49662 377 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 MRPS25P82663 173 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 FAM171A1Q5VUB5 890 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 NECAB2Q7Z6G3 386 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms