RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 GET4Q7L5D6 327 aaPredicted RBP16.58■□□□□ 0.24
USB1-202ENST00000423271 RSAD2Q8WXG1 361 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 STAMQ92783 540 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 KCNN1Q92952 543 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 FIZ1Q96SL8 496 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 KCNH6Q9H252 994 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 KCNK12Q9HB15 430 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 TBX20Q9UMR3 447 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 CDY1Q9Y6F8 540 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 CACNA1HO95180 2353 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 HNRNPDLO14979 420 aaKnown RBP16.57■□□□□ 0.24
USB1-202ENST00000423271 CCL16O15467 120 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 TRAPPC3O43617 180 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 TRAK2O60296 914 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 TBCAO75347 108 aaKnown RBP16.57■□□□□ 0.24
USB1-202ENST00000423271 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
USB1-202ENST00000423271 NMT1P30419 496 aaKnown RBP16.57■□□□□ 0.24
USB1-202ENST00000423271 LIG4P49917 911 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 NTHL1P78549 312 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 RAB33AQ14088 237 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 PPM1LQ5SGD2 360 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 SLC7A14Q8TBB6 771 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 ZSCAN16Q9H4T2 348 aaPredicted RBP16.57■□□□□ 0.24
USB1-202ENST00000423271 EPS15L1Q9UBC2 864 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 SRPRBQ9Y5M8 271 aaKnown RBP16.57■□□□□ 0.24
USB1-202ENST00000423271 BACE2Q9Y5Z0 518 aa16.57■□□□□ 0.24
USB1-202ENST00000423271 NARSO43776 548 aaKnown RBP16.56■□□□□ 0.24
USB1-202ENST00000423271 FAM189A1O60320 539 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 F13A1P00488 732 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 PIGRP01833 764 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 CLTAP09496 248 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
USB1-202ENST00000423271 NHLH1Q02575 133 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 TDGQ13569 410 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
USB1-202ENST00000423271 AXDND1Q5T1B0 1012 aaPredicted RBP16.56■□□□□ 0.24
USB1-202ENST00000423271 SLC39A4Q6P5W5 647 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 ANKS3Q6ZW76 656 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 GRASPQ7Z6J2 395 aaPredicted RBP16.56■□□□□ 0.24
USB1-202ENST00000423271 ST13P5Q8NFI4 369 aaPredicted RBP16.56■□□□□ 0.24
USB1-202ENST00000423271 USP28Q96RU2 1077 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 DUSP12Q9UNI6 340 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 NUB1Q9Y5A7 615 aa16.56■□□□□ 0.24
USB1-202ENST00000423271 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 HNRNPA1P09651 372 aaKnown RBP eCLIP16.55■□□□□ 0.24
USB1-202ENST00000423271 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
USB1-202ENST00000423271 AVPR2P30518 371 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 RPL9P32969 192 aaKnown RBP16.55■□□□□ 0.24
USB1-202ENST00000423271 DDIT3P35638 169 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 ROR1Q01973 937 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
USB1-202ENST00000423271 ZC2HC1CQ53FD0 456 aaPredicted RBP16.55■□□□□ 0.24
USB1-202ENST00000423271 DYMQ7RTS9 669 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 MAP4K3Q8IVH8 894 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 POLIQ9UNA4 740 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 NOTCH4Q99466 2003 aa16.55■□□□□ 0.24
USB1-202ENST00000423271 LACTBL1A8MY62 500 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 TISP43B9A030 160 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 ANKRD63C9JTQ0 380 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 SYN3O14994 580 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 FSHRP23945 695 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 HOXA9P31269 272 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 MCM4P33991 863 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 GUCY2FP51841 1108 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 GTF2BQ00403 316 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 SFR1Q86XK3 245 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 KIF12Q96FN5 646 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 SUSD3Q96L08 255 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 IKZF4Q9H2S9 585 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 PLEKHA5Q9HAU0 1116 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 HCFC1R1Q9NWW0 138 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 IGSF9Q9P2J2 1179 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 STK17AQ9UEE5 414 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 CCDC39Q9UFE4 941 aa16.54■□□□□ 0.24
USB1-202ENST00000423271 A0A087X0B3 334 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 A0A0B4J269 797 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 WDR27A2RRH5 827 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 MYMKA6NI61 221 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 OGTO15294 1046 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 TBC1D4O60343 1298 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 LAMP2P13473 410 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 SCP2P22307 547 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 ARPP19P56211 112 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 PPP2R3AQ06190 1150 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 TCF15Q12870 199 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 MRPL58Q14197 206 aaKnown RBP16.53■□□□□ 0.24
USB1-202ENST00000423271 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 SLC8B1Q6J4K2 584 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 TMEM105Q8N8V8 129 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 KRI1Q8N9T8 703 aaKnown RBP16.53■□□□□ 0.24
USB1-202ENST00000423271 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.53■□□□□ 0.24
USB1-202ENST00000423271 FBXL5Q9UKA1 691 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 ZDHHC9Q9Y397 364 aa16.53■□□□□ 0.24
USB1-202ENST00000423271 ANK1P16157 1881 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 PPEF2O14830 753 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 XYLBO75191 536 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 POU2F2P09086 479 aa16.52■□□□□ 0.24
USB1-202ENST00000423271 LRPAP1P30533 357 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms