RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TRIM59Q8IWR1 403 aa18.97■□□□□ 0.63
LINC00271-201ENST00000421378 OR5B17Q8NGF7 314 aa18.97■□□□□ 0.63
LINC00271-201ENST00000421378 CLP1Q92989 425 aaKnown RBP18.97■□□□□ 0.63
LINC00271-201ENST00000421378 FAM84AQ96KN4 292 aa18.97■□□□□ 0.63
LINC00271-201ENST00000421378 KCNJ18B7U540 433 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 LAG3P18627 525 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 DNAJB2P25686 324 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 EEF1GP26641 437 aaKnown RBP18.96■□□□□ 0.63
LINC00271-201ENST00000421378 ALDH7A1P49419 539 aaKnown RBP18.96■□□□□ 0.63
LINC00271-201ENST00000421378 GUCY2FP51841 1108 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 AP3M2P53677 418 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 MCCD1P59942 119 aaPredicted RBP18.96■□□□□ 0.63
LINC00271-201ENST00000421378 KCNJ12Q14500 433 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 C1orf220Q5T0J3 134 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 SLC35C1Q96A29 364 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 UROC1Q96N76 676 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 TMEM175Q9BSA9 504 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 AAASQ9NRG9 546 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 DPP3Q9NY33 737 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 CACNG4Q9UBN1 327 aa18.96■□□□□ 0.63
LINC00271-201ENST00000421378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.96■□□□□ 0.63
LINC00271-201ENST00000421378 KIAA1671Q9BY89 1806 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 STX10O60499 249 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 LINC00271P0C7V0 271 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 PBX3P40426 434 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 MTIF2P46199 727 aaKnown RBP18.95■□□□□ 0.62
LINC00271-201ENST00000421378 OR1G1P47890 313 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 CLCNKBP51801 687 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 BCAR1P56945 870 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 TCP11X2Q5H9J9 407 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 C1orf127Q8N9H9 656 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 ZNF516Q92618 1163 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 PAAF1Q9BRP4 392 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 HSD3B7Q9H2F3 369 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 MMRN2Q9H8L6 949 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 ITGA11Q9UKX5 1188 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 RWDD3Q9Y3V2 267 aa18.95■□□□□ 0.62
LINC00271-201ENST00000421378 CARNS1A5YM72 827 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 GOLGA6L19H0YKK7 550 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 ALDH2P05091 517 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 GALTP07902 379 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 ZNF18P17022 549 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 LRPAP1P30533 357 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 GTF2H1P32780 548 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 RPL9P32969 192 aaKnown RBP18.94■□□□□ 0.62
LINC00271-201ENST00000421378 GCLMP48507 274 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 SLC11A1P49279 550 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 TPM4P67936 248 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 PPP3CAQ08209 521 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 BIRC3Q13489 604 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 UPP1Q16831 310 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 PPP2R2DQ66LE6 453 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 KCNT2Q6UVM3 1135 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 TRAPPC11Q7Z392 1133 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 TMEM130Q8N3G9 435 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 DDX27Q96GQ7 796 aaKnown RBP18.94■□□□□ 0.62
LINC00271-201ENST00000421378 ZNF558Q96NG5 402 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 NKX2-4Q9H2Z4 354 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 PRG3Q9Y2Y8 225 aaPredicted RBP18.94■□□□□ 0.62
LINC00271-201ENST00000421378 CDH23Q9H251 3354 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 TRIOBPQ9H2D6 2365 aa18.94■□□□□ 0.62
LINC00271-201ENST00000421378 PODXLO00592 558 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 NRP1O14786 923 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 ARHGEF15O94989 841 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 ITGB3P05106 788 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 ZACNQ401N2 412 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 TDRD10Q5VZ19 366 aaKnown RBP18.93■□□□□ 0.62
LINC00271-201ENST00000421378 SV2AQ7L0J3 742 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 COLGALT1Q8NBJ5 622 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 RNF214Q8ND24 703 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 ANKRD20A12PQ8NF67 263 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 RABGGTAQ92696 567 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 TIFAQ96CG3 184 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 TUBGCP2Q9BSJ2 902 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 SLC28A3Q9HAS3 691 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 TMEM8AQ9HCN3 771 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 FAN1Q9Y2M0 1017 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 PCDHB12Q9Y5F1 795 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 CHD9Q3L8U1 2897 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 CHD7Q9P2D1 2997 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 NLRC5Q86WI3 1866 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 PHACTR2O75167 634 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 B3GAT3O94766 335 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 C4BPAP04003 597 aaKnown RBP18.93■□□□□ 0.62
LINC00271-201ENST00000421378 KRT19P08727 400 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 PRKCSHP14314 528 aaPredicted RBP18.93■□□□□ 0.62
LINC00271-201ENST00000421378 CDK11BP21127 795 aaKnown RBP18.93■□□□□ 0.62
LINC00271-201ENST00000421378 POLR2BP30876 1174 aaKnown RBP18.93■□□□□ 0.62
LINC00271-201ENST00000421378 PPM1AP35813 382 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 MXI1P50539 228 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 TAP1Q03518 808 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 MAN2A1Q16706 1144 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 C9orf57Q5W0N0 161 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 KRT39Q6A163 491 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 C15orf39Q6ZRI6 1047 aa18.93■□□□□ 0.62
LINC00271-201ENST00000421378 TGS1Q96RS0 853 aaKnown RBP18.93■□□□□ 0.62
LINC00271-201ENST00000421378 R3HCC1Q9Y3T6 440 aaKnown RBP18.93■□□□□ 0.62
LINC00271-201ENST00000421378 ANO9A1A5B4 782 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 NT5C1B-RDH14C9J2C7 533 aa18.92■□□□□ 0.62
LINC00271-201ENST00000421378 KIF4AO95239 1232 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms