RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ADRB2P07550 413 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 CXCL8P10145 99 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-206ENST00000420121 AVPR2P30518 371 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 HOXA9P31269 272 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 TCF15Q12870 199 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
SSBP3-206ENST00000420121 PDXDC1Q6P996 788 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 ELMSAN1Q6PJG2 1045 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 RSAD2Q8WXG1 361 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 LARP4BQ92615 738 aaKnown RBP12.06□□□□□ -0.48
SSBP3-206ENST00000420121 CLIC6Q96NY7 704 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 TUBGCP4Q9UGJ1 667 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 TBX20Q9UMR3 447 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 DUSP12Q9UNI6 340 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 SRPRBQ9Y5M8 271 aaKnown RBP12.06□□□□□ -0.48
SSBP3-206ENST00000420121 BACE2Q9Y5Z0 518 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 CDY1Q9Y6F8 540 aa12.06□□□□□ -0.48
SSBP3-206ENST00000420121 MORC2Q9Y6X9 1032 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-206ENST00000420121 A0A087X0B3 334 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 K7ENM7 598 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 CLDN3O15551 220 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 NARSO43776 548 aaKnown RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 TRAK2O60296 914 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 POU2F2P09086 479 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 HNRNPA1P09651 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 LAMP2P13473 410 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 NMT1P30419 496 aaKnown RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 GBP2P32456 591 aaPredicted RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 RPL9P32969 192 aaKnown RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 DDIT3P35638 169 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 NTHL1P78549 312 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 GTF2BQ00403 316 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 SPAG1Q07617 926 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 TDGQ13569 410 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 ENOX2Q16206 610 aaKnown RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 SLC8B1Q6J4K2 584 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
SSBP3-206ENST00000420121 MYCT1Q8N699 235 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 STAMQ92783 540 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 SUSD3Q96L08 255 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 USP28Q96RU2 1077 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 IKZF4Q9H2S9 585 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 PARVGQ9HBI0 331 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 IGSF9Q9P2J2 1179 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 USP34Q70CQ2 3546 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 TCHHQ07283 1943 aa12.05□□□□□ -0.48
SSBP3-206ENST00000420121 COL4A3Q01955 1670 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 MYO15AQ9UKN7 3530 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 A0A0B4J269 797 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 WDR27A2RRH5 827 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 TISP43B9A030 160 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 ANKRD63C9JTQ0 380 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 ANHXE9PGG2 379 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 H0YCG3 227 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 SYN3O14994 580 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 CCL16O15467 120 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 TRAPPC3O43617 180 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 PPP1R37O75864 691 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 ABLIM3O94929 683 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 FAM13AO94988 1023 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 CLTAP09496 248 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 NPR3P17342 541 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 LRPAP1P30533 357 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 ROR1Q01973 937 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 ZC2HC1CQ53FD0 456 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-206ENST00000420121 PPM1LQ5SGD2 360 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 AXDND1Q5T1B0 1012 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-206ENST00000420121 CWF19L1Q69YN2 538 aaKnown RBP12.04□□□□□ -0.48
SSBP3-206ENST00000420121 ANKS3Q6ZW76 656 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 GET4Q7L5D6 327 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-206ENST00000420121 GRASPQ7Z6J2 395 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-206ENST00000420121 MAP4K3Q8IVH8 894 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 TMEM105Q8N8V8 129 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 SLC7A14Q8TBB6 771 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 DNAJC19Q96DA6 116 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 PHOX2BQ99453 314 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 STRA6Q9BX79 667 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 ST6GALNAC4Q9H4F1 302 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 PLEKHA5Q9HAU0 1116 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 PIDD1Q9HB75 910 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 HCFC1R1Q9NWW0 138 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 STK17AQ9UEE5 414 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 DMDP11532 3685 aa12.04□□□□□ -0.48
SSBP3-206ENST00000420121 MYMKA6NI61 221 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 LACTBL1A8MY62 500 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 PPEF2O14830 753 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 HNRNPDLO14979 420 aaKnown RBP12.03□□□□□ -0.48
SSBP3-206ENST00000420121 OGTO15294 1046 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 SCP2P22307 547 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 AARSP49588 968 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSBP3-206ENST00000420121 LIG4P49917 911 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 GUCY2FP51841 1108 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 CEBPZQ03701 1054 aaKnown RBP12.03□□□□□ -0.48
SSBP3-206ENST00000420121 HTR4Q13639 388 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 SLC39A14Q15043 492 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 UVSSAQ2YD98 709 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms