RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SMYD4Q8IYR2 804 aaPredicted RBP25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 RDH13Q8NBN7 331 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 HERC2P3Q9BVR0 1158 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 CLSTN2Q9H4D0 955 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 TLE6Q9H808 572 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 MRPL17Q9NRX2 175 aaKnown RBP25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 KIAA1468Q9P260 1216 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 TUBGCP4Q9UGJ1 667 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 COL4A4P53420 1690 aaPredicted RBP25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 FSD2A1L4K1 749 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 F8W810 466 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 NR3C1P04150 777 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 URODP06132 367 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 NFICP08651 508 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 PRCPP42785 496 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 HASPINQ8TF76 798 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 CDCA3Q99618 268 aaPredicted RBP25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 VN1R3Q9BXE9 311 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 GPR62Q9BZJ7 368 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 DMAC2Q9NW81 257 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 NUB1Q9Y5A7 615 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 IRAK3Q9Y616 596 aa25.02■■□□□ 1.6
SMARCB1-205ENST00000417137 EFEMP2O95967 443 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 PAX3P23760 479 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 NFIL3Q16649 462 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 ISM2Q6H9L7 571 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 GPR65Q8IYL9 337 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 RNF168Q8IYW5 571 aaPredicted RBP25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 TRIML1Q8N9V2 468 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 FNBP1Q96RU3 617 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 TSG101Q99816 390 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 NUP62CLQ9H1M0 184 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 PDE11AQ9HCR9 933 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 FRMD4BQ9Y2L6 1034 aa25.01■■□□□ 1.59
SMARCB1-205ENST00000417137 C2orf71A6NGG8 1288 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 PSMA7O14818 248 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 GLUD2P49448 558 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 TFAMQ00059 246 aaKnown RBP25■■□□□ 1.59
SMARCB1-205ENST00000417137 MORC3Q14149 939 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 FAM171A1Q5VUB5 890 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 TAS1R1Q7RTX1 841 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 ADSSL1Q8N142 457 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 EMILIN2Q9BXX0 1053 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 CHST7Q9NS84 486 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 DPP3Q9NY33 737 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 CITO14578 2027 aa25■■□□□ 1.59
SMARCB1-205ENST00000417137 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 BIN1O00499 593 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 MBD3O95983 291 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 DSG1Q02413 1049 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 CYP24A1Q07973 514 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 PSMD6Q15008 389 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 EDRF1Q3B7T1 1238 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 PDXDC1Q6P996 788 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 RBM23Q86U06 439 aaKnown RBP24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 DHTKD1Q96HY7 919 aaPredicted RBP24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 ANKRD36BP1Q96IX9 119 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 MFSD14AQ96MC6 490 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 TTPALQ9BTX7 342 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 IGFLR1Q9H665 355 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 PCDHGC5Q9Y5F6 944 aa24.99■■□□□ 1.59
SMARCB1-205ENST00000417137 CDH23Q9H251 3354 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 HIDE1A8MVS5 230 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 TMEM191BP0C7N4 346 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 NR2F2P24468 414 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 NRIP1P48552 1158 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 CREMQ03060 361 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 HYAL1Q12794 435 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 ADAM9Q13443 819 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 PTPN14Q15678 1187 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 DUOXA2Q1HG44 320 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 KIAA0319Q5VV43 1072 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 C9orf57Q5W0N0 161 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 CEP135Q66GS9 1140 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 CENPPQ6IPU0 288 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 ADGRD2Q7Z7M1 963 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 CEP57Q86XR8 500 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 EFCAB13Q8IY85 973 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 COG5Q9UP83 839 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 R3HCC1Q9Y3T6 440 aaKnown RBP24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 PRRC2BQ5JSZ5 2229 aaKnown RBP24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 PLXNA4Q9HCM2 1894 aa24.98■■□□□ 1.59
SMARCB1-205ENST00000417137 C2CD2LO14523 706 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 TNNC2P02585 160 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 MCM4P33991 863 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 GUCY2FP51841 1108 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 CD300LGQ6UXG3 332 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 USP37Q86T82 979 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 WDR49Q8IV35 697 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 C3orf58Q8NDZ4 430 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 AUTS2Q8WXX7 1259 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 CCDC127Q96BQ5 260 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 INTS13Q9NVM9 706 aa24.97■■□□□ 1.59
SMARCB1-205ENST00000417137 ANO9A1A5B4 782 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 PIRO00625 290 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 PER2O15055 1255 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 MAPK13O15264 365 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 LILRB3O75022 631 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms