RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CES5AQ6NT32 575 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 EPM2AIP1Q7L775 607 aaPredicted RBP15.96■□□□□ 0.15
CHD1-202ENST00000414220 TAS1R1Q7RTX1 841 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 NELFCDQ8IXH7 590 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 C18orf25Q96B23 403 aaPredicted RBP15.96■□□□□ 0.15
CHD1-202ENST00000414220 TIGD1Q96MW7 591 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 GTPBP4Q9BZE4 634 aaKnown RBP15.96■□□□□ 0.15
CHD1-202ENST00000414220 GOLPH3LQ9H4A5 285 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 PCIF1Q9H4Z3 704 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 GOLGA2P5Q9HBQ8 144 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 RXFP1Q9HBX9 757 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 RBAKQ9NYW8 714 aaPredicted RBP15.96■□□□□ 0.15
CHD1-202ENST00000414220 FNIP2Q9P278 1114 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 HCFC2Q9Y5Z7 792 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 TISP43B9A030 160 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 F8W810 466 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 SYN3O14994 580 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 KINO60870 393 aaKnown RBP15.95■□□□□ 0.14
CHD1-202ENST00000414220 LILRB3O75022 631 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 EFEMP2O95967 443 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 CNPP09543 421 aaKnown RBP15.95■□□□□ 0.14
CHD1-202ENST00000414220 LRPAP1P30533 357 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 LTBRP36941 435 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 KCNQ1P51787 676 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 SOX4Q06945 474 aaPredicted RBP15.95■□□□□ 0.14
CHD1-202ENST00000414220 SPAG1Q07617 926 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 SMAD4Q13485 552 aaKnown RBP15.95■□□□□ 0.14
CHD1-202ENST00000414220 KCNB1Q14721 858 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 ZBTB6Q15916 424 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 BMT2Q1RMZ1 405 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 ZBTB41Q5SVQ8 909 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 SPATA1Q5VX52 437 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 JADE1Q6IE81 842 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 ANKRD54Q6NXT1 300 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 ANKS3Q6ZW76 656 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 FMR1NBQ8N0W7 255 aaPredicted RBP15.95■□□□□ 0.14
CHD1-202ENST00000414220 APPL2Q8NEU8 664 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 SCFD1Q8WVM8 642 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 SAAL1Q96ER3 474 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 CBWD1Q9BRT8 395 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 FGFBP2Q9BYJ0 223 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 CACNG4Q9UBN1 327 aa15.95■□□□□ 0.14
CHD1-202ENST00000414220 BARX2Q9UMQ3 279 aaPredicted RBP15.95■□□□□ 0.14
CHD1-202ENST00000414220 COL6A3P12111 3177 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 GRXCR2A6NFK2 248 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 H7C4K7 107 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 KLRC4O43908 158 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 TBX10O75333 385 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 RHOBTB3O94955 611 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 GLUD1P00367 558 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 BMP1P13497 986 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 ITIH3Q06033 890 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 DPYDQ12882 1025 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 STK4Q13043 487 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 CLUL1Q15846 466 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 PSMD5Q16401 504 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 DSTYKQ6XUX3 929 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 BRSK2Q8IWQ3 736 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 XXYLT1Q8NBI6 393 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.94■□□□□ 0.14
CHD1-202ENST00000414220 PIK3R5Q8WYR1 880 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 HSPBP1Q9NZL4 362 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 CLEC1BQ9P126 229 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 TUBGCP4Q9UGJ1 667 aa15.94■□□□□ 0.14
CHD1-202ENST00000414220 GOLGA8IPA6NC78 632 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 GOLGA8JA6NMD2 632 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 TEX28O15482 410 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 CALUO43852 315 aaPredicted RBP15.93■□□□□ 0.14
CHD1-202ENST00000414220 FGFR3P22607 806 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 DLX2Q07687 328 aaPredicted RBP15.93■□□□□ 0.14
CHD1-202ENST00000414220 RTP2Q5QGT7 225 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 CRELD2Q6UXH1 353 aaPredicted RBP15.93■□□□□ 0.14
CHD1-202ENST00000414220 USP37Q86T82 979 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 GLIS3Q8NEA6 775 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 ADAMTS19Q8TE59 1207 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 HDAC7Q8WUI4 952 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 MSLNLQ96KJ4 702 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 FBXL18Q96ME1 805 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 FNBP1Q96RU3 617 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 POP1Q99575 1024 aaKnown RBP15.93■□□□□ 0.14
CHD1-202ENST00000414220 OXCT2Q9BYC2 517 aaPredicted RBP15.93■□□□□ 0.14
CHD1-202ENST00000414220 IKZF4Q9H2S9 585 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 AGPAT3Q9NRZ7 376 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 DPP3Q9NY33 737 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 PRKAG3Q9UGI9 489 aa15.93■□□□□ 0.14
CHD1-202ENST00000414220 PDXKO00764 312 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 CLIC2O15247 247 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 MBTPS2O43462 519 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 EXOC3O60645 756 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 PRPF40AO75400 957 aaKnown RBP15.92■□□□□ 0.14
CHD1-202ENST00000414220 GLP2RO95838 553 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 NFICP08651 508 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 TMEM191BP0C7N4 346 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 PNPLA4P41247 253 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 BRCC3P46736 316 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 CLCN4P51793 760 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 TFAMQ00059 246 aaKnown RBP15.92■□□□□ 0.14
CHD1-202ENST00000414220 KCNC3Q14003 757 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 C12orf56Q8IXR9 622 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 ELOA2Q8IYF1 753 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms