RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 GEMIN4P57678 1058 aaKnown RBP14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 ALCAMQ13740 583 aa14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 PPP1R2P3Q6NXS1 205 aa14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 DNAJC24Q6P3W2 148 aa14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 KCNK18Q7Z418 384 aa14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 ERVK-5Q9HDB9 667 aa14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 MARCOQ9UEW3 520 aaPredicted RBP14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 FMN2Q9NZ56 1722 aa14.68□□□□□ -0.06
CLTCL1-201ENST00000412649 GH1P01241 217 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 ATP6V1B1P15313 513 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 ZFXP17010 805 aaPredicted RBP14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 PHEXP78562 749 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 DDX50Q9BQ39 737 aaKnown RBP14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 TMEM120AQ9BXJ8 343 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 RIC1Q4ADV7 1423 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 CRKLP46109 303 aaKnown RBP14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 PDE1BQ01064 536 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 KRT81Q14533 505 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 FOXR2Q6PJQ5 311 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 ADGRF4Q8IZF3 695 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 PPM1NQ8N819 430 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 NR1H4Q96RI1 486 aaPredicted RBP14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 WDR11Q9BZH6 1224 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 USP17L10C9JJH3 530 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 CFLARO15519 480 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 FKBP6O75344 327 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 MYL2P10916 166 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 RALAP11233 206 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 RASA2Q15283 850 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 LRRC6Q86X45 466 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 NCANO14594 1321 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 KRT38O76015 456 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 LINGO3P0C6S8 592 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 STAT2P52630 851 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 BTKQ06187 659 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 BRDTQ58F21 947 aaPredicted RBP14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 ZNF75CPQ92670 426 aaPredicted RBP14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 SLC35C1Q96A29 364 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 SLC13A1Q9BZW2 595 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 FAM96AQ9H5X1 160 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 SLCO1B3Q9NPD5 702 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 WDR35Q9P2L0 1181 aa14.67□□□□□ -0.06
CLTCL1-201ENST00000412649 CYP19A1P11511 503 aaPredicted RBP14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 SMARCA1P28370 1054 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 AP1B1Q10567 949 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 ACVR2BQ13705 512 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 CATSPER1Q8NEC5 780 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 JDP2Q8WYK2 163 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 PPWD1Q96BP3 646 aaKnown RBP14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 DENND2DQ9H6A0 471 aaPredicted RBP14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 ARHGEF10LQ9HCE6 1279 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 STRNO43815 780 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 YARSP54577 528 aaKnown RBP14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 NPY5RQ15761 445 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 ZC2HC1CQ53FD0 456 aaPredicted RBP14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 MARK2Q7KZI7 788 aaKnown RBP14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 TMPRSS6Q8IU80 811 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 SLC20A1Q8WUM9 679 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 TMEM117Q9H0C3 514 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 DNAJC18Q9H819 358 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 GGA1Q9UJY5 639 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 PDE5AO76074 875 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 CLPTM1O96005 669 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 TAC1P20366 129 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 FSCBQ5H9T9 825 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 LRP10Q7Z4F1 713 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 TRIM74Q86UV6 250 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 TRIM73Q86UV7 250 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 CDKL2Q92772 493 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 MAML3Q96JK9 1138 aa14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 EIF2AK1Q9BQI3 630 aaKnown RBP14.66□□□□□ -0.06
CLTCL1-201ENST00000412649 RASA1P20936 1047 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 CDCA2Q69YH5 1023 aaPredicted RBP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 C3orf62Q6ZUJ4 267 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 ALG3Q92685 438 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 ZNF577Q9BSK1 485 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 MMTAG2Q9BU76 263 aaKnown RBP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 TLR3O15455 904 aaKnown RBP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 ADCY3O60266 1144 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 PPP2R5CQ13362 524 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 CYTH1Q15438 398 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 DDB1Q16531 1140 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 TMEM259Q4ZIN3 620 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 C16orf87Q6PH81 154 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 ARID3BQ8IVW6 561 aaPredicted RBP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 LNX1Q8TBB1 728 aaPredicted RBP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 GALNT8Q9NY28 637 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 SERPINB13Q9UIV8 391 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 TTC36A6NLP5 189 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 PI4K2BG5E9Z4 385 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 EIF3DO15371 548 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 PKN2Q16513 984 aaKnown RBP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 SGSM1Q2NKQ1 1148 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 DARS2Q6PI48 645 aaKnown RBP14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 ZFAND2BQ8WV99 257 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 KLHL4Q9C0H6 718 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 BTG4Q9NY30 223 aa14.65□□□□□ -0.06
CLTCL1-201ENST00000412649 SLC24A2Q9UI40 661 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms